Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12840
- Subject:
- NM_001355023.2
- Aligned Length:
- 1710
- Identities:
- 878
- Gaps:
- 831
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGACAATTTTTCATATATTCCACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTACAGCAAACCTGCCAAATTCATCTTCTACTCTTGGCTGGGTCACACCATGTCAAACTCCATATACTCAGTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATCTAAATAAATTGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGA 592
Query 1 --------------------------------------------------------------------ATGATA 6
||||||
Sbjct 593 GGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATA 666
Query 7 GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT 740
Query 81 CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT 814
Query 155 CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGAACAAATGTGCTT 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGAACAAATGTGCTT 888
Query 229 CCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAAAACAATACCGACTTGGTGATTT 962
Query 303 TTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACAT 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCAGAAAGCATCAAAGAAAACACAT 1036
Query 377 TACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAAAACTGCTTCTATGGAACAGGAG 1110
Query 451 GATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACT 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTCAAGATGTGCTAAAAGAAAAACT 1184
Query 525 ACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGAC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAGTTGGACAAGGAAGGAAATGGAC 1258
Query 599 TTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCT 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCT 1332
Query 673 GCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGA 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAATTCAAACGTGGTATTATTGGTGA 1406
Query 747 AATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGC 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGATTTCAACAAAAGTGGCAGTGTGC 1480
Query 821 CTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGT--------------- 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1481 CTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAATTTCAGGCCATTCAACAGAGGAA 1554
Query 880 -------------------------------------------------------------------------- 879
Sbjct 1555 GAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTGATGAAGTGTCATATGGTGAATT 1628
Query 880 -------------------------------------------------------------------------- 879
Sbjct 1629 TGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTTGTTAACATCTTACGTACTCCAT 1702
Query 880 -------- 879
Sbjct 1703 GGGGGATT 1710
