Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12840
• Subject: NM_001355027.2
• Aligned Length: 1413
• Identities: 879
• Gaps: 534

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACAAACCAGAATTCTTGCCCACCAGTATTATGTCTTTCAGGGTCCCACGACTTGATTTGGGAAGCCTTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGACTCTGATGATGAGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGA  370

Query    1  --------------------------------------------------------------------ATGATA  6
                                                                                ||||||
Sbjct  371  GGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATA  444

Query    7  GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT  518

Query   81  CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT  592

Query  155  CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCAC--------------  214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  593  CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGTAATGGACGTGAT  666

Query  215  --------------------------------------------------------------------------  214
                                                                                      
Sbjct  667  GCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGACCAATCCCTTACAATTTATGAATATCGACAATTTGG  740

Query  215  --------GAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAA  280
                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAA  814

Query  281  AACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCA  354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCA  888

Query  355  GAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAA  428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAA  962

Query  429  AACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTC  502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTC  1036

Query  503  AAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAG  576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAG  1110

Query  577  TTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGT  650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGT  1184

Query  651  GTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAAT  724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAAT  1258

Query  725  TCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGAT  798
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGAT  1332

Query  799  TTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAAT  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAAT  1406

Query  873  TTCAGGT  879
            |||||||
Sbjct 1407  TTCAGGT  1413