Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12840
- Subject:
- XM_011538878.1
- Aligned Length:
- 1806
- Identities:
- 878
- Gaps:
- 927
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGACAATTTTTCATATATTCCACTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTACAGCAAACCTGCCAAATTCATCTTCTACTCTTGGCTGGGTCACACCATGTCAAACTCCATATACTCAGTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATCTAAATAAATTGGATCAGAACATAATACCTGAAAATTTGCCAGCACCAACAGACAAATGTAAACTAAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCAGTATAGTCAGAGAAATGCAGAAAATACAAAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATGAAAAGTGTGTGCAAGATGAAGAAGCCAACACAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAAGGTTATGCAGACAACTCTTGCGATAAACAACAGA 592
Query 1 --------------------------------------------------------------------ATGATA 6
||||||
Sbjct 593 GGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAAGAAGAAACAGATTGTTGCAGAGCAAGTGATGATA 666
Query 7 GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAAATTTAGCCATTGAGCAAAAAGAAAGTGATCATAT 740
Query 81 CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAAAGAACACTACATGAAACAAAGATAAGAACTCATT 814
Query 155 CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCAC-------------- 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTTTGATGGTAGGATCGTATCACGTAATGGACGTGAT 888
Query 215 -------------------------------------------------------------------------- 214
Sbjct 889 GCTTGCAGAGAGCTCATTGGGTTCTTTTTCACTCATGACCAATCCCTTACAATTTATGAATATCGACAATTTGG 962
Query 215 --------GAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAA 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAAAAATAGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGACGAAGAAAAGGAA 1036
Query 281 AACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCA 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCATCTCAGCCTTCCA 1110
Query 355 GAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAA 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTTGGATTCTCTCAA 1184
Query 429 AACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCTTCAAAGCAATTC 1258
Query 503 AAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAG 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAATATTTTCAACAG 1332
Query 577 TTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTTTCACTTAGAAGT 1406
Query 651 GTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAAT 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTGATTATGGAGAAT 1480
Query 725 TCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGAT 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTTATGAAACTGGAT 1554
Query 799 TTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAAT 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCATTCTCAAGTAAT 1628
Query 873 TTCAGGT------------------------------------------------------------------- 879
||||||.
Sbjct 1629 TTCAGGCCATTCAACAGAGGAAGAAATCAAATCATCCTTTCTAGAAACATTAAAAGTTGCCTGCAGCAAGTCTG 1702
Query 880 -------------------------------------------------------------------------- 879
Sbjct 1703 ATGAAGTGTCATATGGTGAATTTGAAGATTACTATGAAGGTTTAAGTATAGGAATAGTAGATGATGAAGACTTT 1776
Query 880 ------------------------------ 879
Sbjct 1777 GTTAACATCTTACGTACTCCATGGGGGATT 1806
