Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12867
- Subject:
- NM_001284190.1
- Aligned Length:
- 1496
- Identities:
- 691
- Gaps:
- 706
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCGGAGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAAGTGGTAACCTCGGCCGGGTTGAGCAAGTCTCTGATTTTGAGTATGATCTGTTCATTAGGCCGGACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATTGCAGAGGGTAATTTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTGTTAACTTCAGTAAAACCAAGAGTCTTTACCGAGATGGGATGGCACCAATGGTGAAATCTACCAGCAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAAATGGCAAAGACTACCACCAAAAAACGTTTATTACTATCGCTGCCCAGACCACAGGAAGAACTATGTGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTACCAGTTTGCTTACTGCTACCCTTATACATATACTCG 518
Query 1 -------------------------------------ATGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTG 37
||||||||.|||||.|||||.|||||.||.|||||||
Sbjct 519 CTTCCAGCATTACCTCGACAGCTTACAAAAGAAAAACATGGATTATTTCTTCCGGGAACAGCTTGGACAGAGTG 592
Query 38 TGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTG 111
|||||||.||..||||||||||||||||||||||||||||.||.||||||||.||||||.||||..||||||||
Sbjct 593 TGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTG 666
Query 112 GTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGGGATCATTGACTTCCT 185
.|||||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||.|||||.||||||||
Sbjct 667 ATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCT 740
Query 186 TGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTG 259
||||||.|||||.||.||||||.|||||||.||.|||.|..|.|||||||||||.||.|||||||||||.||||
Sbjct 741 TGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCTCAACCCTG 814
Query 260 ATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCT 333
|||||||.|||||||||||.|||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 815 ATGGAGTTTACCTGGGCAACTACAGGTGTTCCCTGATGGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTCT 888
Query 334 CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCT 407
|||||||.||||||.||||||||||||||||||||.||.||..||.||||||||||.|||||||||||||||||
Sbjct 889 CCATGGGCCCATCCCACCCTGCATGGAGTGAAACAGCTTATTATCAAGATGTACAATGACCCAAAAACAAGCCT 962
Query 408 GGAGTTTTATATTGACATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATG 481
||||||.||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 963 GGAGTTCTATATTGACATCCACGCTCACTCCACCATGATGAATGGCTTCATGTACGGCAATATCTTTGAGGATG 1036
Query 482 AGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGC 555
|||||||||||||.||||||.||||||||||.||.|||||.|||||||||||.|||||||||||||||.|.|||
Sbjct 1037 AGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAATGCCGAGGACTTCTCCTATACTAGC 1110
Query 556 ACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTC 629
||||||||.|||.||||.|||||||||||||||||||||||.||||||||.||.||.||.|||||||||.|.||
Sbjct 1111 ACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGCTTCCTGGGCGGGCTTCTGGACCACTCATC 1184
Query 630 CTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACATCATCAGTGGCACCACGGCTGCTGTGCCCTACACTG 703
.||.|||||.|||||||||||.||||||||||||||||||||..|.||.||.||.|||||.|||||||||||||
Sbjct 1185 ATACTGCTATACCCTAGAGGTTTCCTTCTACAGCTACATCATTGGGGGTACTACAGCTGCAGTGCCCTACACTG 1258
Query 704 AAGAAGCCTGTAT------------------------------------------------------CCT---- 719
|||||||||.||| |||
Sbjct 1259 AAGAAGCCTATATGAAACTGGGACGGAACGTGGCAAGAACATTTCTAGATTATTACCGGCTGAACTCCCTGGTT 1332
Query 720 ----------TAGTCCCCA--CCCAGCCTTGGG---------------------------CCAGCC-------- 746
.|||||||| ||.||.|||.|| |||.||
Sbjct 1333 GAGAAGATAGCAGTCCCCATGCCAAGACTTCGGAAAGAAAAAGCCCCTCCTTGCAAGCACCCACCCCCAAGGGG 1406
Query 747 CTCATCCAGCCGAGAGTATCCAAGTCTGACA----GGTCAGGAATTAGGCCCCCAGCTCAGG------------ 804
||||.||||| |..||.|||| .||.|| ||.||.||| .|.||||..
Sbjct 1407 CTCAACCAGC--AACGTCTCCA---TTGGCAAAGGGGACAAGAA---------GAACTCACTGAACCACAAAGA 1466
Query 805 ---------------- 804
Sbjct 1467 CCCATCAACCCCCTTT 1482
