Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12867
- Subject:
- XM_011240652.2
- Aligned Length:
- 1671
- Identities:
- 692
- Gaps:
- 882
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCGGAGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAAGTGCCTGCAGGAGTATCTTCTCATGCCAGAGACAAGAAGGTAACCTCGGCCGGGTTGAGCAAGTCTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATTTTGAGTATGATCTGTTCATTAGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAAATGTGAAAGAATTGCAGAGGGTAATTTTCAACATTGTTAACTTCAGTAAAACCAAGAGTCTTTACCGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGGATGGCACCAATGGTGAAATCTACCAGCAGACCAAAATGGCAAAGACTACCACCAAAAAACGTTTATTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATCGCTGCCCAGACCACAGGAAGAACTATGTGATGTCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTA 518
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 519 CCAGTTTGCTTACTGCTACCCTTATACATATACTCGCTTCCAGCATTACCTCGACAGCTTACAAAAGAAAAACA 592
Query 2 TGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGC 75
|||||||.|||||.|||||.|||||.||.||||||||||||||.||..||||||||||||||||||||||||||
Sbjct 593 TGGATTATTTCTTCCGGGAACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGC 666
Query 76 CCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACC 149
||.||.||||||||.||||||.||||..||||||||.|||||||||||||.||||||||||||||||||||.||
Sbjct 667 CCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC 740
Query 150 CTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAAT 223
.||.|||||||||||||||||.|||||.||||||||||||||.|||||.||.||||||.|||||||.||.|||.
Sbjct 741 ATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAAC 814
Query 224 ACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATG 297
|..|.|||||||||||.||.|||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||
Sbjct 815 ATTTAGTCTTCAAGATTGCTCCAATGCTCAACCCTGATGGAGTTTACCTGGGCAACTACAGGTGTTCCCTGATG 888
Query 298 GGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT 371
||.|||||.||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||.||
Sbjct 889 GGGTTTGACCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGCCCATCCCACCCTGCATGGAGTGAAACAGCT 962
Query 372 CATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACATCCATGCCCACTCCACCATGA 445
.||..||.||||||||||.|||||||||||||||||||||||.||||||||||||||.||.|||||||||||||
Sbjct 963 TATTATCAAGATGTACAATGACCCAAAAACAAGCCTGGAGTTCTATATTGACATCCACGCTCACTCCACCATGA 1036
Query 446 TGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTC 519
||||||||||||||||.|||||.||||||||||||||||||||||||||.||||||.||||||||||.||.|||
Sbjct 1037 TGAATGGCTTCATGTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTC 1110
Query 520 CTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGG 593
||.|||||||||||.|||||||||||||||.|.|||||||||||.|||.||||.||||||||||||||||||||
Sbjct 1111 CTTTGCCAGAATGCCGAGGACTTCTCCTATACTAGCACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGG 1184
Query 594 CCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACA 667
|||.||||||||.||.||.||.|||||||||.|.||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 1185 CCGGCGCTTCCTGGGCGGGCTTCTGGACCACTCATCATACTGCTATACCCTAGAGGTTTCCTTCTACAGCTACA 1258
Query 668 TCATCAGTGGCACCACGGCTGCTGTGCCCTACACTGAAGAAGCCTGTAT------------------------- 716
||||..|.||.||.||.|||||.||||||||||||||||||||||.|||
Sbjct 1259 TCATTGGGGGTACTACAGCTGCAGTGCCCTACACTGAAGAAGCCTATATGAAACTGGGACGGAACGTGGCAAGA 1332
Query 717 -----------------------------CCT--------------TAGTCCCCA--CCCAGCCTTGGGCCAGC 745
||| .|||||||| ||.||.|||.|
Sbjct 1333 ACATTTCTAGATTATTACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCG------ 1400
Query 746 CCTCATCCA------------------GCCGAGAGTATCCA---AGTCTGACAGGTCA---------------- 782
||||| |..|.|||.||||| .||||||..|.|.|
Sbjct 1401 ----ATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTG 1470
Query 783 ---GGAATTAGGCCCCCA---GCTCAGG---------------------------------------------- 804
|||||| |||| |.||.||
Sbjct 1471 CTGGGAATT-----CCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTG 1539
Query 805 -------------------------------------------------------------------------- 804
Sbjct 1540 GATTGTGGTAGCAGTACCCTACCTCTGGGCCTCATCTCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACAT 1613
Query 805 ------------------------------------------- 804
Sbjct 1614 GGCAATGTCCAACTCTATACTCCTGCCAGACCATTCTTTTCAC 1656
