Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12883
Subject:
NR_156699.2
Aligned Length:
3484
Identities:
1555
Gaps:
1927

Alignment

Query    1  -------------------------------ATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACA  43
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GGCGCGAGCCTGCGTTTTCCGGCCAGAGGACATGATGCAGGGGGAGGCACACCCTAGTGCTTCCCTTATTGACA  74

Query   44  GAACCATCAAGATGAGAAAAGAAACAGAGGCTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATG  117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAACCATCAAGATGAGAAAAGAAACAGAGGCTAGGAAAGTGGTCTTAGCCTGGGGACTCCTAAATGTATCTATG  148

Query  118  GCTGGAATGATATATACTGAAATGACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTG  191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCTGGAATGATATATACTGAAATGACTGGAAAATTGATTAGTTCATACTACAATGTGACATACTGGCCCCTCTG  222

Query  192  GTATATTGAGCTTGCCCTTGCATCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATA  265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTATATTGAGCTTGCCCTTGCATCTCTCTTCAGCCTTAATGCCTTATTTGATTTTTGGAGATATTTCAAATATA  296

Query  266  CTGTGGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAG  339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTGTGGCACCAACAAGTCTGGTTGTTAGTCCTGGACAGCAAACACTTTTAGGGTTGAAAACAGCTGTTGTACAG  370

Query  340  ACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAG  413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACTACGCCTCCACATGATCTGGCAGCAACCCAAATCCCTCCCGCTCCACCTTCCCCTTCAATTCAGGGTCAGAG  444

Query  414  TGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACA  487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGTGTTGAGTTATAGCCCTTCTCGTTCGCCCAGTACCAGTCCCAAGTTCACCACCAGCTGTATGACTGGTTACA  518

Query  488  GCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGT  561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCCTCAGCTGCAAGGTCTGTCCTCAGGTGGCAGTGGTTCTTATAGCCCTGGAGTGACCTACTCGCCCGTCAGT  592

Query  562  GGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAG  635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGTTATAATAAGTTGGCGAGCTTTAGCCCCTCTCCTCCTTCTCCGTACCCTACCACTGTTGGACCAGTGGAGAG  666

Query  636  CAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGA  709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGTGGATTGAGATCTCGCTACCGTTCTTCACCTACCGTCTACAACTCACCTACTGACAAAGAAGACTACATGA  740

Query  710  CCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGGGAGCCCA  783
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCGACCTACGAACTTTGGATACTTTTCTCAGAAGTGAAGAGGAGAAACAGCATAGGGTTAAGCTGGGGAGCCCA  814

Query  784  GATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGGGATTATGCACAAACTTT  857
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GATTCTACCTCTCCTTCCAGCAGTCCTACTTTCTGGAACTATAGTCGTTCTATGGGGGATTATGCACAAACTTT  888

Query  858  AAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGATGAAGCCGATCTCAGCT  931
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAAGAAGTTTCAGTATCAGCTTGCCTGTAGGTCTCAGGCCCCATGTGCTAACAAAGATGAAGCCGATCTCAGCT  962

Query  932  CTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACAACTTCTTGATCATATGGATTCATGG  1005
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTAAACAAGCCGCAGAAGAGGTCTGGGCAAGAGTGGCTATGAATAGACAACTTCTTGATCATATGGATTCATGG  1036

Query 1006  ACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCAC  1079
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACAGCTAAATTTAGAAATTGGATCAATGAGACAATATTAGTGCCACTTGTTCAAGAGATTGAGTCTGTCAGCAC  1110

Query 1080  ACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGG-----------------------------------  1118
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct 1111  ACAGATGAGACGAATGGGTTGTCCAGAGCTACAGATAGGAGAGGCTAGTATTACTAGCTTGAAACAAGCTGCCC  1184

Query 1119  --------------------------------------------------------------------------  1118
                                                                                      
Sbjct 1185  TGGTTAAAGCGCCTCTCATTCCGACTTTGAACACAATCGTTCAGTATCTAGACCTTACTCCAAATCAGGAATAC  1258

Query 1119  ----------------------------------------------AGAACTATCTCAGGGAGGTTGTATGAGC  1146
                                                          ||||||||||||||||||||||||||||
Sbjct 1259  TTGTTTGAAAGGATCAAAGCTTTTAAAAATTTCACCTTGTTGCCACAGAACTATCTCAGGGAGGTTGTATGAGC  1332

Query 1147  TCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTAT  1220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCATTTCGATGGAACAGAGGTGGCGACTTCAAAGGACGAAAGTGGGATACAGACCTGCCCACCGATTCTGCTAT  1406

Query 1221  CATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAAGTATCGCGACGGAAAAACTT  1294
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1407  CATCATGCATGTATTTTGCACCTACCTTGATTCCAGATTACCTCCACATCCGAAGTATCCCGACGGAAAAACTT  1480

Query 1295  TTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAATGAGAATGTTTTTTGCATTTATCAG  1368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTACTTCTCAGCACTTTGTTCAGACACCAAATAAACCAGATGTTACAAATGAGAATGTTTTTTGCATTTATCAG  1554

Query 1369  AGTGCTATCAACCCTCCCCGTTATGAGCTCATCTACCAGCGTCATGTATACAACCTGCCAAAGGGCAGAAATAA  1442
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGTGCTATCAACCCTCCCCATTATGAGCTCATCTACCAGCGTCATGTATACAACCTGCCAAAGGGCAGAAATAA  1628

Query 1443  TATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGAGTTAATC  1516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TATGTTTCATACATTGTTGATGTTTCTCTACATCATAAAGACCAAAGAGTCAGGAATGCTTGGGAGAGTTAATC  1702

Query 1517  TTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGCGAG---------------------------------  1557
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct 1703  TTGGTCTATCTGGTGTGAATATATTGTGGATCTTTGGCGAGTAGCAAGTCATATATTTAATTCTGACATTTAGA  1776

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 1777  CTATTTCACTGAACCAGAAGTCGAAACTAAACATCTCTGAGCCACTGACTCTTCTGAAATAAAATACACATGGG  1850

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 1851  TGTATGTTACAGACTCTTTAGATTTAACAGAAAATGTAGCTGTTATGAAATGTAATTGTAAAAATATGTCCCGT  1924

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 1925  ATCTTCTATATCGAGACATTGCCTTTAATTTTATATCGCTTTTCAGAAATTTCAGTTGACTACAAAACTGCAAC  1998

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 1999  CCTTCGGATTTTTATTGACTCAAAATAGTGCCATTCCCCTTAATGAAATAGATTTTGAGTCTTTTTTTCATTGT  2072

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2073  AACCCCCAAATGAGAATCATCTACCTGATTCTTGTACCAAAAAAAAATTTTTTTCAGTCTTTTTTTTTTTTAGA  2146

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2147  GAGGGTCTCTGTCAACGCAGACTGGAGTGCAGTGGCACGATCTTAGCTCACTACAACTTCTGCCTCCCAGGCTC  2220

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2221  AAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCACCACGCCCAGCTAATTTTTG  2294

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2295  TATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCCCGAACTCCTGACCTCAGGTGATCCACCC  2368

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2369  ACCTCGGCCTCCCAAAGTGCTGGGATTATAGGTGCGAGCCACTGCGCCCAGCCTCAGTTATTTTATTTAACAGT  2442

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2443  GTAAGTACTTAGAAAGTAAGAAAATTGCTGATTTAGTTTTTTTTTTTTTTTTTTTAATGTTTCCCCAGCATTCT  2516

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2517  GCAAGTTAGGCCAAAGCCCACATTCAAAGAAATGAGATTAACTCTTAAGTAATGTATTAAGTTTATGTATATTT  2590

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2591  TAAAATATTATTAAAGGAGGTTTGAAAGTATTGACATTTAAAAAGTCAACACTTAGATTAAATTTAGCTGGTAG  2664

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2665  TTTTAATTTGGGTTTTAGTTAAGAGTGTGAGGACATCAGGAAAACTGTTTACTACTTTGGTTTTAGCAGCTCAG  2738

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2739  TTTTACTATTCCATAATGTGTTATTTTTAAAGTTCTCTTTTTAAGATCACAGTGATATCCTATCTTCAAATTTT  2812

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2813  TTAAATATGTTCAAAATATCTGGAGGGTGAGAAGTTACCAAGTTTGTATGTTTTGTTTGACTCACCATCTTTAT  2886

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2887  TTTCTGTATATGTAGTAGCTGGCAATTGCATATATTTTCTTGATTAACATATTAGAGACTGCTTCCATCATCTT  2960

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2961  ATGTAAACCTGGAAACAGCTGAAACTAGTCTTTTCTGAAGAACCGTGTATCAGTGTTAGATGTGCATCCCGTTT  3034

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3035  TGTCATTCCCTCAGACTTTGAATACAGTCATTACTCTCTGGAAGAGAAATGTAAGTATATTTTTTGTTATCTGC  3108

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3109  AGTATGGTTTAACATGTATTAATAATACACATATGCAGACTCACTAAAGTATCCCCAGTAATTAGTAAATTCCA  3182

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3183  AATTTAAGTCAGTACAGTTCTGTATTTGTAAATTCTGTCTTTCAAAAAGTTGTTCGTGTTTTTAAAAGTTGATG  3256

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3257  TCCAAAGGAAAGGAGCTTCTTTTAAGTACTTTTGGTGTATGTTGAATATTTATTTGCTATGATATTCTAGAAGA  3330

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3331  AAATATCAAACATGTTAAATATAAGAACATGTTAAAATTTAAATTTGCTATTTCAAAAGTTACTGAAGATGTCT  3404

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 3405  TGGAATAACAATTGTCATGCTGTTAAACTAGTTGCATATACTTCATTAAAAGCACCATGGAGAAACATTTTAAC  3478

Query 1558  ------  1557
                  
Sbjct 3479  AATGCA  3484

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