Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12917
- Subject:
- NR_137634.1
- Aligned Length:
- 6806
- Identities:
- 581
- Gaps:
- 6166
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCTGCGCTTGCGCACTGGGTGCGCTACGCGTGCGCGGTGGGCGGAGCGCGCCTCTACCTTCTTTACCAGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCTTTCCTAGCTCTGCACAACGCCGTGTGCTGCTCCTGTTTCATTGCCCTGTCGCGCAGTGTCGCTGCCGCT 148
Query 1 ------------------------------ATGGCTGGCTACGAATACGTGAGCCCGGAGCAGCTGGCTGGCTT 44
||||||||||||||||||||||||||.|||||||||.|.|||||
Sbjct 149 GCGGAGTGGGCGTTCAGTTTTCGGGTCGTCATGGCTGGCTACGAATACGTGAGCCCAGAGCAGCTGTCGGGCTT 222
Query 45 TGATAAGTACAAGTACAGTGCTGTGGATACCAATCCACTTTCTCTGTATGTCATGCATCCATTCTGGAACACTA 118
|||.||||||||||||||.|||.||||||||||.|||||.|||||||||.|||||||||||||.||||||||||
Sbjct 223 TGACAAGTACAAGTACAGCGCTTTGGATACCAACCCACTCTCTCTGTATATCATGCATCCATTTTGGAACACTA 296
Query 119 TAGTAAAGGTATTTCCTACTTGGCTGGCGCCCAATCTGATAACTTTTTCTGGCTTTCTGCTGGTCGTATTCAAT 192
||||.|||||.|||||||||||||||||.||||||||.|||||.||||||||||||.|||||.|.||.||||||
Sbjct 297 TAGTGAAGGTGTTTCCTACTTGGCTGGCTCCCAATCTTATAACCTTTTCTGGCTTTATGCTGCTTGTGTTCAAT 370
Query 193 TTTCTGCTAATGGCATACTTTGATCCTGACTTTTATGCCTCAGCACCAGGTCACAAGCACGTGCCTGACTGGGT 266
||.||.||..||.|||||||.||.||||||||.|||||.||
Sbjct 371 TTCCTACTCCTGACATACTTCGACCCTGACTTCTATGCTTC--------------------------------- 411
Query 267 TTGGATTGTAGTGGGCATCCTCAACTTCGTAGCCTACACTCTAGATGGTGTGGACGGAAAGCAAGCTCGCAGAA 340
||||||.|||||.|||||||||||.||.||||
Sbjct 412 ------------------------------------------AGATGGAGTGGATGGAAAGCAAGCACGGAGAA 443
Query 341 CCAATTCTAGCACTCCCTTAGGGGAGCTTTTTGATCATGGCCTGGATAGTTGGTCATGTGTTTACTTTGTTGTG 414
|||||||.|||||.||.|||||||||||.|||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 444 CCAATTCCAGCACCCCGTTAGGGGAGCTGTTTGACCATGGCCTGGACAGTTGGTCGTGTGTTTACTTTGTTGTG 517
Query 415 ACTGTTTATTCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTTATCTCCTGCTATGGGTAGT 488
|||||.||.||||||||||||.|||||.|.|||||.||||||||||||||||||||||||||||||||||||||
Sbjct 518 ACTGTGTACTCCATCTTTGGACGAGGACCGACTGGCGTCAGTGTTTTTGTTCTTTATCTCCTGCTATGGGTAGT 591
Query 489 TTTGTTTTCTTTCATCCTGTCCCACTGGGAAAAGTATAACACAGGGATTCTTTTCCTGCCATGGGGATATGACA 562
||||||||||||.||||||||.||||||||.||||||||||||||..|||||||||||||||||||||||||||
Sbjct 592 TTTGTTTTCTTTTATCCTGTCTCACTGGGAGAAGTATAACACAGGCGTTCTTTTCCTGCCATGGGGATATGACA 665
Query 563 TTAGCCAGGTGACTATTTCTTTTGTCTACATAGTGACTGCAGTTGTGGGAGTTGAGGCCTGGTATGAACCTTTC 636
|||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 666 TTAGCCAAGTGACTATTTCTTTTGTCTACATAGTGACTGCGGTTGTGGGAGTTGAGGCC--------------- 724
Query 637 CTGTTTAATTTCTTATATAGAGACCTATTCACTGCAATGATTATTGGTTGTGCATTATGTGTGACTCTTCCAAT 710
|||.||||||||||||||||||||||||||
Sbjct 725 --------------------------------------------TGGGTGTGCATTATGTGTGACTCTTCCAAT 754
Query 711 GAGTTTATTAAACTTTTT-------------------------------------------------------- 728
||||||||||||||||||
Sbjct 755 GAGTTTATTAAACTTTTTTAGAAGCTATAAAAGCAACACGCTGAAGCACAAGTCCGTCTATGAAGCCATGGTCC 828
Query 729 ------------------------------------CAGCGTGGATCCTTTGGTCACCTTCAGATATTTTAGAG 766
|||.|||||||||.|||||||||||||||||.|||||.
Sbjct 829 CCTTCTTCTCTCCGTGTTTGCTCTTCACTTTGTGTACAGTGTGGATCCTCTGGTCACCTTCAGATATCTTAGAA 902
Query 767 CTACATCC------------------------------------------------------------------ 774
.||||.||
Sbjct 903 ATACACCCTAGAATATTCTACTTCATGGTTGGAACAGCTTTTGCCAATATCACATGTCAGCTAATTGTTTGCCA 976
Query 775 -------------------------------------------------------------------------- 774
Sbjct 977 AATGAGCAGCACGCGGTGCCCGACTTTGAACTGGTTACTGCTTCCTCTCCTCTTGGTTGTGGCAGCGGTGATCG 1050
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1051 TAGGTGCAGCCACCTCCCGCCTTGAGAGCGCCCTCCTTTACACACTCACGGCTGCCTTCACTCTGGCTCACATC 1124
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1125 CATTATGGCGTACAAGTGGTGAAGCAGCTGAGCCGACATTTTCAGATTTATCCTTTTTCATTGAGGAAACCAAA 1198
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1199 CTCAGATTGACTAGGAATGGAAGAACAGAATATCGGCCTGTAATCTTGACAAAGTACTGTAAATAGATGCGTGT 1272
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1273 AAATACTTCATCCATCACCAGTGAACTGAACGGATCTGCTCGGCAGACATGGGATCTCAGTGTGTGCTATATGG 1346
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1347 ACAGCAAGAATGAAACCTGGGCTCAGCTTGTGGAATTGTGGACTTTCTAACTCCCAGCTTACTCTATTTTATTT 1420
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1421 TATTTTTTTTATAGAGCCATGAGACATTTGGTTAAGCACAGTGTACATTAAACCAGCTAAATGTTCCTAGCTTC 1494
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1495 CTGAGTCCATGGCGTTTTGACTCACAAAGTTAAAGATGATTTACTTTCATGTTTCAGGTCCCCGGGTTGAGTCA 1568
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1569 GGAACACTAATGACATTCAGATAGCCACAGCATGTCTTAATATTTGATACGTTATGGTCGGTCTTTAGCTGTGG 1642
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1643 ATCATTCCCACAGCCAAAATGTAATGCAGAAAAGCATCAAAAAAGTCTCTTCAGCCAGAGATGCCAGTGACTCC 1716
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1717 AGAACAGGGTACAGTTGCCAAATCCCGGTTGCCCTCCAGTGAACTGCCTTCCCCACCTGCTGTGGAGGTTGTCC 1790
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1791 AGTATCCCGGCTCTTACTGTATCTGATAAATGGTTTAATTTTCTTTTAGAGTGGAGTGTTCTGCCGTTACTTAG 1864
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1865 TAGGGAATGGGTTGTAATTACAGTCGGCCGTTGTGGCATAGCTCATTGTCTAATTGTGGCGGTTCCTCTCTCAG 1938
Query 775 -------------------------------------------------------------------------- 774
Sbjct 1939 CAGTGCATTGCTAGGATTGGGTGCCTGTGAGCTGTGATTTTTAAGAATACGTGTGACAGTCCCAATCTTGTGGT 2012
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2013 ACTTACTTGTGAGGATATGCAGTAGCTCGTGAGAGGAAATTTAAACTGGAGTTAGGAGTCTCAGAGCTCCACAT 2086
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2087 CGGCCACAGTTAGCACCCTGGCACTGTCTGTCCAGTTGCTGCTTGCTTTCCTTCTCCCTGGGGGTGAGCTGTTG 2160
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2161 TGGTTTTTATTCTCACACAGGATAACGAACGAGATTGTCTCTCTCCCCTAATTTGCCCACCTCCCTATTTGAAG 2234
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2235 AAAACTTTTGATATATATGCCTTACTGAGTATTTACTTCCCTTAATATGACTCAAAATAATTTTTAAGGTTTAC 2308
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2309 TGACAACATAAAATAATTCCTTTCACTATATTGTGGTTATTTTATAAATCACACCTTTTTATGAATGTGGAGAT 2382
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2383 TTTTTTTTTCCTTTGGACTTTGTCTTTATTTAGTTTTGTGGTGGTGAAATTTACTTGCTGATTTTATTTTCCAC 2456
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2457 TGAATGAAGTTTGTGCTTAAATGAAGAGTGTGTCTTAAACCCTTTTTTTTGGACAGGTTGCACTTGGATAAAAT 2530
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2531 AGGCACCACTGTGTTGATATGTAATTAAATTCATAACTATTATTATCTATGAATGGAACCATTCTTAAATATTG 2604
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2605 TAGCTCATTCCTTTGTTGAATATCTGTCTGCTGCTTTGTAAAAACAAAACAAAAAACAAAAACAAAACCATTGG 2678
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2679 TACGTCACGTAAACATTTTAAAATTCTAATCATTGTCGTCCAGGCTGTCGAAGATAAGCCCAGGGGCTTACGTG 2752
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2753 TATCTGGAGACATTCTCTGAGACAAAAAATGAAAGCAAAAATTGGTGAGAAGTTGATGTGAAAATGGGTAGTGA 2826
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2827 TTCTGTGCTTGTTAATAAATTGCCATCATGGAGGCTGGAAGGTGAGCCGGTTGTGTGAGGATAACTGTTCCGTC 2900
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2901 CACCTTGTGCTCTGTGTGAGTTTGTTAGAAGGTCCTTGTTTTCTTGACCTTGTACACAGTAATATTCATTTGTA 2974
Query 775 -------------------------------------------------------------------------- 774
Sbjct 2975 TAAAGGAAAATAACTGATAAATATTTATAAAATAATGAATTTGGACCACAGGCTTTCTTCACCTTGTACAGTAG 3048
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3049 ACTGAAAAATCATGTCCTATAATTTTAGGGCTTTTTTTTTTTTTCTTTCTGTTTTTCAAAATGTATGTTCTCTT 3122
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3123 TATTGCATCAAGTGGATTTAAAAGAAAATGCTTTGTGCCTTTTGTTTGTTTGTTTTTAAACTTGCCTCTGTGAT 3196
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3197 AGTAAAGAAATGTGTTTCTAGTTCTGTTGTCACTGTTGAATGGCAGAGGACGCTGCTGGCAGGGGGAAGTGGAA 3270
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3271 GGGAGCACACAGAGTCTCAGAATCTTGTGAACTCCCACAGAACTCAGAATCCCTCCCAGCCTGCTCATGCCCTC 3344
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3345 CGTCATGGTTGTGCATCGCGAGATGCCCATATGTTGTAGCGATACAGCGGCGGATGCGGGCTTGATTGTCAGGG 3418
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3419 GCTCTGTGTATCTCTGCCACGCCCCTTCCTGTAACTTTCCCAAGTGTAAACGGTACTGCAAGCTTATGCATAGT 3492
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3493 GTTTCCCAGGTGGCACGGAGTTGCCCTTTGGGAAGCAGCATCGCGGTTGGAAGTGCACACGCATGCCTTCTGTA 3566
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3567 CTTGGCCCTGGCCAGGTGCAAGTTTCTTTTCAGGCTGTGGAAAAGCCCTTTTCAAGCTTGTCAGGAAATAATCT 3640
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3641 CCCTGTGTTTGGGAGGGTGTGGGGTGCAAAAAACATTAACAGTGCTTGGATGAAGGCTGCCACCTGGTCTTTCA 3714
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3715 ATGGTATTTATGACCTTACTGCAGTTCACTATTTAAAATTGCCATAATCATTGTCTTGGTTTTCAAAAATACTA 3788
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3789 ATAGAGTTTATAGGTTTTAGAGCAATAGAGTGACTTTGAAGTAAAAATATAACCATTCTTTCTTGGCATTTCAA 3862
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3863 TTATTATGATTGAAATACTTCTAATTCCAATTTTGAAAAAAATGTTGAGCATGTTTAGGGTGTTATAGTAGCAC 3936
Query 775 -------------------------------------------------------------------------- 774
Sbjct 3937 TGCTAATATGCCACTTGCCCACTCCTGAGGCATTGGGAGAGAGGTGTACATCTGGGCTTAGCACATGCTAAATA 4010
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4011 CATTAAGGGAGTATATTGTAGTCAGAGTAGGTATGAAAGGCACCTTGCTTCCTGAAGCCGACCTCAGCTCCATG 4084
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4085 ATCTATGGAGGAATAAACTGGTCATTTGGAGGTTTTTAAGTCTAGGACGACTTCTTACCTTTAAAATGTAACTT 4158
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4159 GAAACCTACTTGTAACTTTTCCTGTCACTGAGCAAGCAGTTAGGACAGAAACAGCTCTCTGCATCCCGGCTGGC 4232
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4233 TTGCAGACAGATTCATGTGGTGAATGCCTTAAATCTCTTGGTTGGTGAAGGACTGGAAACAACACTGAGAAGGT 4306
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4307 TAAGCCTGAGGTCTGCAGCTTTGACTCTGGGTCTCCAAATTAGCCAGAAACAGATGCAGAGATGGAGTTGGCTG 4380
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4381 TGGGGATGCGCGTGTTTGGGATGCTCTCATCATTACTTCTGGATTTGATCAAGCCCTCTTTAGGAACTGTGACG 4454
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4455 ACAGACCAGAATTTTCTTTGTCCAATGAAATGTCATTTTAATGCAAAATATCTTGAACACTCACTGTGGGTGAG 4528
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4529 TAATTCGCTGCCCTATGCCAGCCTTCCAGGAAGGCTTTTCCTTTATTAATTATGTAAACTAGTGGCTTGTACAT 4602
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4603 ATTAAATGTTTTGTTTTTGTTTCTAAATCATCTATAAATGGCTGACATCACAGCAGGCAGTGACCTCGGGGTGT 4676
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4677 GTGGTGAATCATGGTGGTCTACCTTTTCCAGAGAGAGAGAGAGGAGGATGTGTCTGTGATGAGCGTGGGAATTG 4750
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4751 GACTTGCTGGCTGATTTATTTCCACTGTTTTACAAACTAAATGTAACTTACTCTCTAACCTGCATGTTAGTAGT 4824
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4825 GTGCTTTGCTGAGAGACTACGCCAGCTGGTTACCATCTGTATGATTTTTTAAGCAGAAATATATTCTTTTTATA 4898
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4899 GCTATCTGTTGAGCTCACGTTTAGGGTAGCAGAAGGAATTTTGACATTTGCAGCCTTTCACAGGCAGCCTGAGC 4972
Query 775 -------------------------------------------------------------------------- 774
Sbjct 4973 AAGGTTTGTTCATTCAGTGAGGAAGGCTGGGTTCCCCGGATGGAAAAAAAGCGCTACACACGCATTTTAGAGTA 5046
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5047 TTCAATAAGGGCTTGTCTGTCGGTAGGAAAAAACCTGTGGGTGGAACAGAAAGGAGGCTCTGGGCTTTTAGATT 5120
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5121 ATTGTGATTTCCCTTTCAGAAAATCATTCTTAGAGAGCTGGATGGAGTCAGAGCCCAGCTGCTTTAATGGCAGT 5194
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5195 TGGACCATGGCCATTGAGAGTCTAAAATAGGAGCAGAAGCCGCTGCCCTTTCAGCAGCACTAAAACGGAAATCA 5268
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5269 GAGATGGTAGTGAGGCCAAGGACTGTCCAGTGCTATGGGTCTTTTCTATCACGTTGGCTAAGCTCTTTTAAGCA 5342
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5343 GTTTCTCTGGGTAACAGAATTCCTGGTAAGCACGTAGGGATGGCCTGTTGAGATTGCTGTTTCTCAGCAGCAGG 5416
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5417 GAGCATCAGAGCCGCCTGCCATCTCGACTGTCGTGTTATCAGTTGGATATCCTCATCAGAGCAGCCATCCTCCA 5490
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5491 GACAAAGACTCAGTTGTGTATATGGTTAGTTCATTCAGAATGTCCCAAGAAAGCAGAATTCAGCACTGAACTCA 5564
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5565 GAATTTCAGTTAAACAACAAAATCTCCCCACTTTTGGGCAGAGTGGAAGACAATAATGGCCAAGGTACTCAGGA 5638
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5639 ACCCAGGTTTCCTCTCCCTTCCTGCCTAACGGTGGTAACTGAATGGTAACTGAAGAAAATTAAAGTGCTGCTTT 5712
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5713 TGTGAGTGAGGCTTCATGTTCTATGCTGAGAACAGGTAACAGGGGCTGTGTGGCTAGGGGTTTAATTTGGTGCC 5786
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5787 TTTATGGGTAGACTTCTGAAGCAAGAGTATAATTTCTTCCCAGATACTTAAAAAACACCACGAGAACAGGTGGG 5860
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5861 GTATGTTTGCCACAAAGAATGAAAAAGATAGCAGAGATGAAGAAAAAGAGGACATAAAATGTCTCCCCTTCCAG 5934
Query 775 -------------------------------------------------------------------------- 774
Sbjct 5935 GTACTTTTAGTTGTAGTTGGCCTGCCTAGGGCTTTGGTGTTAGTGTAGCGTTTGTTTACTCTGCTTCCGTGTGC 6008
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6009 TCTGCATATGTACATGTTTACTATGCATACCTGTTCTCTATGTATATATGATATGGTATCTAATGGACTTGACT 6082
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6083 CTTGATTATCAGCCGGGTGGCAACCCTCATTAGTCTGTTGCTTTGTGTGGATTTGGCGTGCCCATGGCCCACAT 6156
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6157 GGAAAGCCACTTCCCCACCTTTCCCCTCCAGGGCATCTCAGCCCTGAGAAAGCCCTCACAGTAGATGATATTTC 6230
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6231 ACTTCCCTTTCACCAGGGGACTTCGAGCCAGAAAGACTGGTTTCCAGAATGCTGGCTATTACTTCGGGGTTGAG 6304
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6305 GTTTCTGGGTCGGCCCGGCCCTCTTTTGGCTGGGAGGCAGCTTTGGGAGCAGTGTGCTATGAACTCCATCTGGG 6378
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6379 AGATACTTGATCTTGCTGGAGCAGAGCTTTGCCCTTGCTTCACTTTTCTGGAGTGTTGCAAGGCTTGTGATTCC 6452
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6453 ATGTAGAGTAGAATATTCTCGGTAGTTTGAATGTGGGTTTTGCATTGTCTGTGTTCTTGTCACCGGATTCTAGA 6526
Query 775 -------------------------------------------------------------------------- 774
Sbjct 6527 AACCTTGATCTTTCAACTGGATTTATGTTTGTGTCTGCTGCTATAGACTCCAAAAGTTAAAGCAGTAGGTTCTA 6600
Query 775 ------------------------------------------------------------------------ 774
Sbjct 6601 GTTTTCAATTGTTTAATTCTTTATTGATAAATATTTATTGTAATAAAAAATAAATAATTTTTAAATCTTTTT 6672
