Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12928
- Subject:
- NM_183415.3
- Aligned Length:
- 3212
- Identities:
- 696
- Gaps:
- 2488
Alignment
Query 1 ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAGAAGAAAGGCTTGT 74
Query 75 GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGTCGGAGTCGACTGC 148
Query 149 AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAAAAGAAGTGCACTT 222
Query 223 TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGAGATTTGAGAAGTT 296
Query 297 GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCCCTGGCTTGTTCTA 370
Query 371 AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTTTCTCAAGCAGCTC 444
Query 445 AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCTTCACAGACACTTC 518
Query 519 AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGTGCAAATATAATGG 592
Query 593 GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAG-TGCTGTGA-----TGGGCTG---------TTTCCT 651
|||||||||||||||||||||||||||||||||||||| |..|||.| |||.||| ..||||
Sbjct 593 GACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGCAAGACCCCGTCCT 666
Query 652 GATTTGGTTTCATATGCTC-CTCACAACA-------------------ACCCTGTGA--GGTGGTCCGTTGGCA 703
|.|...|.||.|.||.| .|.|||.|| .|||||||| |.||..|.|||..||
Sbjct 667 --TGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGCTGCACAGTTCTCA 738
Query 704 G--AAGCTGGT----------------------ATGACTGGCAGTTGTCTCGC--------------------- 732
| ||.|||.| |||.||| ||.|| ||
Sbjct 739 GACAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTG-----TGCCT-GCTCTGGTGACTCATCTCAGCAC 806
Query 733 -------------------------------------------------------------------------- 732
Sbjct 807 AGTGACCCCTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATATTTTTAAGAGACC 880
Query 733 -------------------------------------------------------------------------- 732
Sbjct 881 AAGATCGATGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGGCAACCTCCTACAC 954
Query 733 -------------------------------------------------------------------------- 732
Sbjct 955 TTGGGCTCCCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCACCCAGACGCTGTG 1028
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1029 CTACTGTCGGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTGGTTCTCCC 1102
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1103 AATCTGTGGATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTTGTGGGGGGTGCCT 1176
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1177 CTGATCCGGATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAGCCCACGCACAGCC 1250
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1251 AGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCGGCATCAGTCCGGA 1324
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1325 ATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAACATCTGTGTCCTC 1398
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1399 TACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTTACCTTGATGACCT 1472
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1473 GCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTCTTGGAATGCCTGA 1546
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1547 ACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTCGCGGCACCTCATC 1620
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1621 ACAATCCTTGATGACATTGAAGTTTATGAAGAACAGATTTCATTCAAACTGGAAGAGCTGGTCACTATCTCCTC 1694
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1695 TTTCCTGAATTCTTTTGTGTTTAAGATGATCTGGGATGGAATTGTAGAGAACGCCAAGGGTGAGACCTTGGAGC 1768
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1769 TGTTCCAGTCTGTCCACGGGTGGCTTATGGTGCTGTACGAGCGGGACTGCCGGCGGCGCTTCACCCCCGAGGAC 1842
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1843 CACTGGCTGCGAAAGGATCTCAAACCTAGCGTGCTCTTCCAAGAACTCGACAGGGACAGAAAACGGGCACAGTT 1916
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1917 GATCCTGCAGTACATCCCACATGTCATCCCTCACAAAAACAGAGTTCTACTGTTTCGAACCATGGTTACCAAGG 1990
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1991 AGAAGGAGAAACTGGGGCTGGTGGAAACCAGCTCTGCCTCCCCGCATGTCACTCACATCACCATCCGCCGGTCC 2064
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2065 AGGATGCTGGAGGACGGCTACGAGCAGCTTAGGCAGCTCTCCCAGCACGCCATGAAGGGGGTCATCCGTGTGAA 2138
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2139 GTTTGTCAATGACCTCGGGGTGGACGAAGCAGGGATTGATCAAGACGGTGTTTTTAAGGAGTTCTTGGAAGAGA 2212
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2213 TCATCAAGAGAGTTTTTGACCCAGCACTCAATCTGTTCAAGACAACCAGTGGGGATGAGAGGCTGTACCCCTCA 2286
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2287 CCCACATCCTACATCCATGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGGGGAAGGCTGTGTA 2360
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2361 TGAGGGAATTGTGGTGGACGTGCCATTTGCATCCTTCTTCCTGAGCCAACTGCTTGGGCACCACCACAGCGTCT 2434
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2435 TCTATAGCTCGGTGGATGAACTGCCTTCTCTGGACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGCGCTAT 2508
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2509 GATGGGGACATCACTGACCTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCAGCTTGTTTGCCATGA 2582
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2583 ACTGATTCCTGGAGGGAAGACCATTCCTGTTACAAATGAAAATAAAATTAGCTACATCCATCTGATGGCACATT 2656
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2657 TTCGAATGCACACTCAAATAAAAAACCAAACAGCTGCCCTCATTAGCGGATTCCGTTCCATTATCAAACCCGAG 2730
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2731 TGGATCCGAATGTTCTCAACTCCTGAACTGCAGCGTCTCATCTCTGGCGACAATGCTGAGATTGATCTGGAAGA 2804
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2805 TTTAAAGAAGCACACAGTCTACTACGGTGGTTTCCATGGAAGTCACAGAGTCATCATCTGGCTCTGGGATATTC 2878
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2879 TGGCCTCCGACTTCACACCGGATGAGAGAGCTATGTTTCTGAAGTTCGTGACCAGCTGCTCCAGACCCCCGCTC 2952
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2953 CTGGGATTCGCCTACCTCAAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGATCAGGACACCGGGGA 3026
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3027 CACTCTGGGCAGCGTCCTCCGGGGCTTCTTCACCATCCGCAAGCGGGAGCCAGGCGGCCGCCTGCCCACCTCCT 3100
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3101 CCACCTGCTTCAACCTGCTCAAGCTGCCCAACTACAGCAAGAAGAGCGTCCTCCGCGAGAAGCTGCGCTACGCC 3174
Query 733 ------------------------------ 732
Sbjct 3175 ATCAGCATGAACACGGGCTTTGAACTCTCC 3204
