Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12928
- Subject:
- XR_429118.3
- Aligned Length:
- 3627
- Identities:
- 696
- Gaps:
- 2903
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGCCGTCCGTTGTGCGCCTAGGGGCCAGTTTTCTTTCCAGCCTCCCCGGCCGGAGTGGGTTCCAGCTTTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTGGGGAGGGCATTTATCCCACCTCCGCTATTTCAGCTGCCAGAGGGGAGGCAAGGTGTGGGGAAGTTTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCCGGGCGAAGAAGCTCTGCGGAACTGTCATTTTCCGGAACTGGATGCTTGCTTCCTGGCGGGGTTCTGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGAACACCGCGGGGCAAGATGGCGGTAGTGCGTCGGCTGCTGCCCCGGGTCTGGCAGAACTCGGGTGTTTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGAGACAGTGGCAGCTGCGGCCCCGACCCCAAGTGCGGGGACCTCCGGCGAATAAAGGTCGGCCTGCGGGTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCGGTAGGGCCTGCGGTCCGGCCTGCGGGAGAACTGGGTCGTCAGTCCTCCGAGTGGTGGGGCTGGGGACTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAGGGAGTTGGCTCTAGGGCACAGTCCCTGCCTGGCCAGGTCGGAGGAACAAGTGCTGGGATCTGGCGTGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTCCAGGGGCTCTTTCCGCGGCCCTTTCCACCTCTTTTCACTTTGGGGACGGTAGGCCTTTATAAACGGACTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGCTGGGTGATTTGTTCCTGTGGTTGTTGATGCCGAGGAAAGACTCTGGGCCCCAGGACTCACCTAAACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTCGAATACTGTTCGCTCGCTGTGTGACCTTGGAAAAAATAACAAGCTTTTCTGAAGTGAGAAGCTGTTCTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCACGAGTCCTGTGCAAGATCACTAATGATTACCTGGCATTTCTGCGACACAGGCAGGTCCTCAGGGTTTGTG 814
Query 1 -------------ATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAG 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAGTTTGCAAACATGTTCACCCTGTCTCAGACCTCGAGAGCATGGTTCATCGATAGAGCCCGTCAGGCACGAG 888
Query 62 AAGAAAGGCTTGTGCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGT 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGAAAGGCTTGTGCAGAAGGAACGGGAGCGGGCAGCTGTTGTGATCCAGGCCCATGTCCGGAGTTTTCTCTGT 962
Query 136 CGGAGTCGACTGCAGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAA 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGGAGTCGACTGCAGAGAGATATCAGGAGAGAGATTGATGACTTTTTTAAAGCAGATGACCCTGAGTCCACTAA 1036
Query 210 AAGAAGTGCACTTTGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGA 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAAGTGCACTTTGTATTTTCAAGATTGCCAGGAAACTGCTGTTCCTATTCAGAATCAAAGAGGATAATGAGA 1110
Query 284 GATTTGAGAAGTTGTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATTTGAGAAGTTGTGTCGCAGCATCCTGAGCAGCATGGATGCTGAGAATGAGCCTAAGGTGTGGTATGTGTCC 1184
Query 358 CTGGCTTGTTCTAAGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTT 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGGCTTGTTCTAAGGACCTCACCCTCCTTTGGATTCAACAGATCAAGAACATTTTGTGGTACTGCTGTGATTT 1258
Query 432 TCTCAAGCAGCTCAAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCT 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTCAAGCAGCTCAAGCCTGAAATCCTGCAGGACTCCCGACTCATCACCCTGTACCTCACGATGCTTGTCACCT 1332
Query 506 TCACAGACACTTCAACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGT 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCACAGACACTTCAACGTGGAAAATTCTTCGGGGAAAAGGTGAAAGTCTTCGACCAGCGATGAACCACATTTGT 1406
Query 580 GCAAATATAATGGGACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAG-TGCTGTGA-----TGGGCTG-- 645
||||||||||||||||||||||||||||||||||||||||||||||||||| |..|||.| |||.|||
Sbjct 1407 GCAAATATAATGGGACATCTCAACCAGCATGGATTTTATTCTGTGCTGCAGATATTGTTAACCCGTGGCCTGGC 1480
Query 646 -------TTTCCTGATTTGGTTTCATATGCTC-CTCACAACA-------------------ACCCTGTGA--GG 690
..|||| |.|...|.||.|.||.| .|.|||.|| .|||||||| |.
Sbjct 1481 AAGACCCCGTCCT--TGTCTATCCAAAGGCACTTTAACAGCAGCTTTTTCTCTAGCGTTACGCCCTGTGATTGC 1552
Query 691 TGGTCCGTTGGCAG--AAGCTGGT----------------------ATGACTGGCAGTTGTCTCGC-------- 732
||..|.|||..||| ||.|||.| |||.||| ||.|| ||
Sbjct 1553 TGCACAGTTCTCAGACAATCTGATTCGGCCGTTCCTCATCCACATCATGTCTG-----TGCCT-GCTCTGGTGA 1620
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1621 CTCATCTCAGCACAGTGACCCCTGAGCGCCTCACTGTTTTAGAATCCCATGACATGCTTCGTAAATTCATCATA 1694
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1695 TTTTTAAGAGACCAAGATCGATGCCGTGATGTATGTGAAAGTTTAGAAGGATGCCATACGCTTTGTCTAATGGG 1768
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1769 CAACCTCCTACACTTGGGCTCCCTCAGCCCCAGAGTGTTAGAGGAGGAGACAGATGGGTTCGTGAGTTTGCTCA 1842
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1843 CCCAGACGCTGTGCTACTGTCGGAAGTATGTGTCTCAGAAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTT 1916
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1917 GGCTGGTTCTCCCAATCTGTGGATTATGGCCTTAACGAGTCAATGCACTTGATCACCAAACAGCTGCAGTTCTT 1990
Query 733 -------------------------------------------------------------------------- 732
Sbjct 1991 GTGGGGGGTGCCTCTGATCCGGATCTTCTTCTGTGACATCCTGAGCAAGAAGCTACTGGAGAGCCAGGAGCCAG 2064
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2065 CCCACGCACAGCCAGCATCCCCTCAGAATGTGCTCCCAGTGAAGAGTCTCCTAAAGCGTGCTTTTCAAAAGTCG 2138
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2139 GCATCAGTCCGGAATATTCTCAGGCCTGTCGGGGGTAAACGGGTCGACTCTGCAGAAGTCCAGAAGGTTTGCAA 2212
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2213 CATCTGTGTCCTCTACCAGACCTCGCTGACAACTCTCACACAGATTCGGCTGCAGATACTCACAGGTCTCACTT 2286
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2287 ACCTTGATGACCTGCTTCCCAAACTGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTAAAGCTCTTC 2360
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2361 TTGGAATGCCTGAACAATGACACTGAAGAGTCCAAGCAACTCTTGGCCATGCTGATGCTGTTCTGTGACTGTTC 2434
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2435 GCGGCACCTCATCACAATCCTTGATGACATTGAAGTTTATGAAGAACAGATTTCATTCAAACTGGAAGAGCTGG 2508
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2509 TCACTATCTCCTCTTTCCTGAATTCTTTTGTGTTTAAGATGATCTGGGATGGAATTGTAGAGAACGCCAAGGGT 2582
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2583 GAGACCTTGGAGCTGTTCCAGTCTGTCCACGGGTGGCTTATGGTGCTGTACGAGCGGGACTGCCGGCGGCGCTT 2656
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2657 CACCCCCGAGGACCACTGGCTGCGAAAGGATCTCAAACCTAGCGTGCTCTTCCAAGAACTCGACAGGGACAGAA 2730
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2731 AACGGGCACAGTTGATCCTGCAGTACATCCCACATGTCATCCCTCACAAAAACAGAGTTCTACTGTTTCGAACC 2804
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2805 ATGGTTACCAAGGAGAAGGAGAAACTGGGGCTGGTGGAAACCAGCTCTGCCTCCCCGCATGTCACTCACATCAC 2878
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2879 CATCCGCCGGTCCAGGATGCTGGAGGACGGCTACGAGCAGCTTAGGCAGCTCTCCCAGCACGCCATGAAGGGGG 2952
Query 733 -------------------------------------------------------------------------- 732
Sbjct 2953 TCATCCGTGTGAAGTTTGTCAATGACCTCGGGGTGGACGAAGCAGGGATTGATCAAGACGGTGTTTTTAAGGAG 3026
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3027 TTCTTGGAAGAGATCATCAAGAGAGTTTTTGACCCAGCACTCAATCTGTTCAAGACAACCAGTGGGGATGAGAG 3100
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3101 GCTGTACCCCTCACCCACATCCTACATCCATGAGAATTACCTGCAGCTCTTCGAGTTTGTGGGGAAGATGCTGG 3174
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3175 GGAAGGCTGTGTATGAGGGAATTGTGGTGGACGTGCCATTTGCATCCTTCTTCCTGAGCCAACTGCTTGGGCAC 3248
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3249 CACCACAGCGTCTTCTATAGCTCGGTGGATGAACTGCCTTCTCTGGACTCCGAGTTCTATAAAAACCTCACCTC 3322
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3323 CATCAAGCGCTATGATGGGGACATCACTGACCTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCAGC 3396
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3397 TTGTTTGCCATGAACTGATTCCTGGAGGGAAGACCATTCCTGTTACAAATGAAAATAATTCGTGACCAGCTGCT 3470
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3471 CCAGACCCCCGCTCCTGGGATTCGCCTACCTCAAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGAT 3544
Query 733 -------------------------------------------------------------------------- 732
Sbjct 3545 CAGGACACCGGGGACACTCTGGGCAGCGTCCTCCGGGGCTTCTTCACCATCCGCAAGCGGGAGCCAGGCGGCCG 3618
Query 733 - 732
Sbjct 3619 C 3619
