Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12944
- Subject:
- XM_005273347.3
- Aligned Length:
- 1589
- Identities:
- 528
- Gaps:
- 997
Alignment
Query 1 ATGTTTCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTT----CAGT 144
||| ||..|||.| |||..||| ||||
Sbjct 1 ----------------------ATG-GGCCGCCGG-----------------------CCAGGCTTGTGCCAGT 28
Query 145 AGTAGGCATTTT---TCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAG-TTCCAGTACTGTA 214
||| ||| ||.| ||| ||||.|| .|...|||.||| .|||||..|
Sbjct 29 ----GGC--TTTGGATCCC-----TGG-------CCTGCTT-------CCCCCAACCCAGCCTCCAGACC---- 73
Query 215 ACTGGAGACCTGACAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGT--CATGAACGCTGAG---- 282
||..||| .||||..|||.||| |||...||...||| |..||| |.|||
Sbjct 74 -----AGCGCTG---GCCTGCTCCACACA------------CTCCGCAGCACCGTCCCGGGAA--CCGAGCGTC 125
Query 283 ---GGAGATG-AGCCT-TCATCAAAACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGT 351
||.||.| .|||| ||..|| ||||||||||||||||||||||||||||||||
Sbjct 126 GGCGGGGAGGCCGCCTCTCCGCA-------------------GTGTGATAAAGCGGAATTGGGAATATATATGT 180
Query 352 AGCCATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAA 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AGCCATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAA 254
Query 426 GTTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGAC 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 GTTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGAC 328
Query 500 ATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCA 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 329 ATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCA 402
Query 574 GACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGG 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 403 GACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGG 476
Query 648 T--------------------------------------------------------------ACAATGCAACT 659
| |||.|.|||.|
Sbjct 477 TTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAAT 550
Query 660 TTT-----TT-------------------TTTTT---------TTTTTCTTTTTT-----GAGACA-----GG- 689
||| || ||.|| |.|||||.|.|| |||||| ||
Sbjct 551 TTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGA 624
Query 690 ---GTCTCACTCTGTC-GCCCAA---------------CTGGAGTGCA------GTGGCACAAT---------- 728
||.|.|||||..| |||||| |||...|||| ||.||| |||
Sbjct 625 TTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCA-AATACGCATCTGT 697
Query 729 ---------CATGGC-------TCACTACAGC---CTCAA--------CCTACTGGGC-------TCAAGTAAT 768
||.||| | |.|| ||| |.||| .||||| ||| ||.|||..|
Sbjct 698 TGTATAATCCAAGGCGAGGTGAT-ATTA-AGCTGACGCAATTGGCAATGCTACT-GGCAGAGATTTCCAGTGTT 768
Query 769 CCTCTC-------ATTTCGGCTTCC------------------------------------------------- 786
.|.|.| ||..|.|||||.
Sbjct 769 GCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACT 842
Query 787 -------------------------------------------------------------------------- 786
Sbjct 843 ATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGT 916
Query 787 -------------------------------------------------------------------------- 786
Sbjct 917 CTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTAT 990
Query 787 -------------------------------------------------------------------------- 786
Sbjct 991 GAGGTACAGCAGGTACCAAAAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGT 1064
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1065 CCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACT 1138
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1139 TTCCTGACACTGGAATTCCAGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTAC 1212
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1213 TCTGCAGAAAAGGAAGATGTTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGC 1286
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1287 TAGACTGTCACTTCTTACAGAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATC 1360
Query 787 ----------------------------------- 786
Sbjct 1361 ATCTGCCTTTATTGGCAAAGTTCAGACTTGAGCTC 1395
