Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12944
- Subject:
- XM_017002776.1
- Aligned Length:
- 1570
- Identities:
- 439
- Gaps:
- 1100
Alignment
Query 1 ATGTTTCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGCATTTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCTGACAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 ATCAAAACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAA 370
|.| .||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---------ATG-------GAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAA 58
Query 371 CGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59 CGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATG 132
Query 445 TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT 206
Query 519 ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG 280
Query 593 AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGT------------------ 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281 AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAG 354
Query 649 --------------------------------------------ACAATGCAACTTTT-----TT--------- 664
|||.|.|||.|||| ||
Sbjct 355 ATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAA 428
Query 665 ----------TTTTT---------TTTTTCTTTTTT-----GAGACA-----GG----GTCTCACTCTGTC-GC 704
||.|| |.|||||.|.|| |||||| || ||.|.|||||..| ||
Sbjct 429 CCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGC 502
Query 705 CCAA---------------CTGGAGTGCA------GTGGCACAAT-------------------CATGGC---- 734
|||| |||...|||| ||.||| ||| ||.|||
Sbjct 503 CCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCA-AATACGCATCTGTTGTATAATCCAAGGCGAGG 575
Query 735 ---TCACTACAGC---CTCAA--------CCTACTGGGC-------TCAAGTAATCCTCTC-------ATTTCG 780
| |.|| ||| |.||| .||||| ||| ||.|||..|.|.|.| ||..|.
Sbjct 576 TGAT-ATTA-AGCTGACGCAATTGGCAATGCTACT-GGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCA 646
Query 781 GCTTCC-------------------------------------------------------------------- 786
|||||.
Sbjct 647 GCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAA 720
Query 787 -------------------------------------------------------------------------- 786
Sbjct 721 GGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAAT 794
Query 787 -------------------------------------------------------------------------- 786
Sbjct 795 TTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAA 868
Query 787 -------------------------------------------------------------------------- 786
Sbjct 869 AAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAA 942
Query 787 -------------------------------------------------------------------------- 786
Sbjct 943 TTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCC 1016
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1017 AGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATG 1090
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1091 TTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACA 1164
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1165 GAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAA 1238
Query 787 ---------------- 786
Sbjct 1239 GTTCAGACTTGAGCTC 1254