Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12945
- Subject:
- NM_021421.4
- Aligned Length:
- 1632
- Identities:
- 735
- Gaps:
- 774
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGACGTGGCGCTGTGTGAGGAGGGGCTACGGCCGCTGTGTGGCGGGGCGAGGCCGATACTCCATGTTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTGGCGCAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGTAGCAGGCATTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATAATTGGAGATCTGACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAGAGATGAGCCCTTATCTAAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATACGAAGGAC 444
Query 1 ---------------------------------------------------------------ATGTCCTATAA 11
|||||.|||||
Sbjct 445 CTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATGTCTTATAA 518
Query 12 TATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGA 85
.||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.||||||||||
Sbjct 519 CATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTTACACTGGA 592
Query 86 GTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAA 159
|||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|||||||||
Sbjct 593 GTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGGAAGTTCAA 666
Query 160 GAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGAC 233
||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.|||...||
Sbjct 667 GAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAAATGAAAAC 740
Query 234 AGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGG 307
|||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.|||||||||||||
Sbjct 741 AGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACCCAGTGG 814
Query 308 AATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATT 381
|.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||||||.||.
Sbjct 815 AGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCCAAGATC 888
Query 382 CCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAA 455
|||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||||.|||||
Sbjct 889 CCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGACATTAA 962
Query 456 GCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTA 529
||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.|||.||||
Sbjct 963 GCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCTGTCCTA 1036
Query 530 TTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAAT 603
||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct 1037 TTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAATTAAAT 1110
Query 604 TATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCC 677
||||||||.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCC 1184
Query 678 AATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGA 751
|||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||||||||.|
Sbjct 1185 AATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAGAAAAAA 1258
Query 752 CAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAAT 825
|||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.||||.||..||
Sbjct 1259 CAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCCTCGCAT 1332
Query 826 TTACAGCACCATTTCAGTTTGTCATCTGTTTAT----------------------------------------- 858
.||||||||..||||||.|||||||||||.|||
Sbjct 1333 CTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGTGACCAC 1406
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1407 CTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGCTCAGGGGC 1480
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1481 CAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGCAAGACTTG 1554
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1555 TGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTCAGGCTTGA 1628
Query 859 ---- 858
Sbjct 1629 GCTC 1632
