Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12945
Subject:
NM_021421.4
Aligned Length:
1632
Identities:
735
Gaps:
774

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGACGTGGCGCTGTGTGAGGAGGGGCTACGGCCGCTGTGTGGCGGGGCGAGGCCGATACTCCATGTTTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTGGCGCAGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGTAGCAGGCATTTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATAATTGGAGATCTGACCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAGAGATGAGCCCTTATCTAAAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATACGAAGGAC  444

Query    1  ---------------------------------------------------------------ATGTCCTATAA  11
                                                                           |||||.|||||
Sbjct  445  CTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATGTCTTATAA  518

Query   12  TATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGA  85
            .||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.||||||||||
Sbjct  519  CATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTTACACTGGA  592

Query   86  GTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAA  159
            |||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|||||||||
Sbjct  593  GTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGGAAGTTCAA  666

Query  160  GAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGAC  233
            ||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.|||...||
Sbjct  667  GAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAAATGAAAAC  740

Query  234  AGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGG  307
            |||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.|||||||||||||
Sbjct  741  AGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACCCAGTGG  814

Query  308  AATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATT  381
            |.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||||||.||.
Sbjct  815  AGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCCAAGATC  888

Query  382  CCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAA  455
            |||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||||.|||||
Sbjct  889  CCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGACATTAA  962

Query  456  GCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTA  529
            ||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.|||.||||
Sbjct  963  GCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCTGTCCTA  1036

Query  530  TTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAAT  603
            ||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct 1037  TTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAATTAAAT  1110

Query  604  TATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCC  677
            ||||||||.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCC  1184

Query  678  AATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGA  751
            |||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||||||||.|
Sbjct 1185  AATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAGAAAAAA  1258

Query  752  CAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAAT  825
            |||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.||||.||..||
Sbjct 1259  CAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCCTCGCAT  1332

Query  826  TTACAGCACCATTTCAGTTTGTCATCTGTTTAT-----------------------------------------  858
            .||||||||..||||||.|||||||||||.|||                                         
Sbjct 1333  CTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGTGACCAC  1406

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1407  CTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGCTCAGGGGC  1480

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1481  CAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGCAAGACTTG  1554

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1555  TGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTCAGGCTTGA  1628

Query  859  ----  858
                
Sbjct 1629  GCTC  1632

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