Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12945
Subject:
NR_037579.1
Aligned Length:
2904
Identities:
735
Gaps:
2046

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCCGGAGTCGCACTGCTTAAAGGAACTGCCCCAGAAGGCAAGATGGTGACCGGGCCTGCGGCGAGACGCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTCCCAGCATGCCTAGCGGCCGGCCGGGAGCCGAGTGATGGGGATCCGGTAGGACCCGGCGAGCGGCCGAAGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGGTGCAGCCGCGGGCCCGGGCGTTGGGCGCTCACAGAGAGCCAAGATGGAGACGTGGCGCTGTGTGAGGAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCTACGGCCGCTGTGTGGCGGGGCGAGGCCGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAGAAAATACGAAGGACCTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTC  370

Query    1  ------ATGTCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCG  68
                  |||||.|||||.||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||
Sbjct  371  TCAGTGATGTCTTATAACATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACG  444

Query   69  GCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTT  142
            .|||||.|||||||||||||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||
Sbjct  445  TCCAGTGTTACACTGGAGTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTT  518

Query  143  GTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGT  216
            ||.|.||.|||||||||||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||
Sbjct  519  GTCTACAGGAAGTTCAAGAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGT  592

Query  217  GAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTT  290
            ||||||||.|||...|||||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||
Sbjct  593  GAATATAAAATGAAAACAGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTT  666

Query  291  GTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTAC  364
            .||.||||||||||||||.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||
Sbjct  667  ATCTGTGAACCCAGTGGAGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTAC  740

Query  365  TCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCA  438
            ||.|.||||||||.||.|||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||
Sbjct  741  TCCTGCAGCCCAAGATCCCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCA  814

Query  439  AGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGA  512
            .||||.|||||.|||||||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||
Sbjct  815  CGGCGCGGTGACATTAAGCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGA  888

Query  513  TGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAA  586
            ||||||||.|||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  889  TGGCAGCTCCTGTCCTATTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAA  962

Query  587  AGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAA  660
            |||||||||||||.|||||||||||.|||.|.||.|||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGGAAGGAAAATTAAATTATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAA  1036

Query  661  AGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGT  734
            ||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||
Sbjct 1037  AGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGT  1110

Query  735  ACCAAAAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTG  808
            .||.|||||||||||.||||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.||||||
Sbjct 1111  TCCCAAAGTAGAAAAAACAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTG  1184

Query  809  AAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT------------------------  858
            |.|||.||||.||..||.||||||||..||||||.|||||||||||.|||                        
Sbjct 1185  ACAAAGTGTCCTCGCATCTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGA  1258

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1259  GTTCCAGAGGTGACCACCTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGA  1332

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1333  GAACACTGCTCAGGGGCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTC  1406

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1407  TAACAGAGCAAGACTTGTGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTG  1480

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1481  GCCAAGTTCAGGCTTGAGCTCTGACTGCTGCTCATTCACGGGACTTCCTGTCTGTATTCTTTTCGAAGGATGTA  1554

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1555  AAAATTTTAAGTATTTGTATGCTGTTCACTTTTTGTGATGTGGGGTTCTGAATTTCTGTTATATGCTTGAAACA  1628

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1629  GATTGGAAGAAACAAATTTACAACTTTTTTTTAAATGAAATATTTTCCTGACAACTGATGTTTAAAGAACTTTA  1702

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1703  TGGTAAATGACTTCTAAGTCCTGTTAAAGTTGACAGCATTTTTAAAATGTAGTTCATCTTGGCCCTGAAGATAG  1776

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1777  GAAGTCAGTGCTTTTTAGTTCATCCGGTGGTCCTGCCCGGACCTGCAAAGCTCAGCATGCTGCCTTTTCTGGAG  1850

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1851  ACCCAGTTTCATTGGGAGAAGCCTGTGCGTGTTCTTAGAAATCACTGGGTCACTCACTCCTCCACAGGGTCCAA  1924

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1925  GCTTCTGAAGAGGCTTGACAATGTGTATGCTGTAGAGAACATTGGCCCATGTCACTGCTGCCCTGAGCTGTGGG  1998

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1999  ATGTGCCTACATTTTGTAGTGGAAATAGTTGAGAAGTATAGATCACTCTCATACGATACGGTGGTGCACACCTT  2072

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2073  TAATCTTATTAGCATTTGGCTGATGGCAGCAGGTAGCTGTGTAAAGCCAGCTTTAGCAACACAACAAGTGTGAG  2146

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2147  GGCAGCCTGGGCTACATGAAACCCTATCTTAAGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTCAAGTCCT  2220

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2221  TTATATATGTCCACTCCTGCCTGGAAAAGGTTGCCATAAGGAAAGTAGATGAGCCAGGTGCATCCACAAACACC  2294

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2295  CTTAATCCCAGCATCTGGGAGACAGAGGCAGGAGGATCACTGTGTCCCAGGCTGACTAGAACTACACACAAGGC  2368

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2369  CCTGTGTCTCAAAGACCAGCAAAAGGTGGCAGACTCCAGGTTGTCCCTCTGTCTCCTGTACTTGTCTTTCTGTT  2442

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2443  TAACGATGGTGAAAGGCCCTTGGGTCAGGAGTGACATTTCGTTGAGCCGGTTTTGTATAAATGTATTAGAGAAG  2516

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2517  TGGTCTTTGGAAGGAAGCGAGAGCTCCGCAGCTGTTTATCATTTGCCTCTAACATGCAGGAGTCATCATGGGAG  2590

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2591  CTGTCACTTAGACCCGGTAGGGAGCCTCGCTGACTGTTGACTGTACAGTTGAGTTTGGTACCGTGGTACAGCAG  2664

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2665  GGTGCCATGGCGCTTGCACTGTTCTCTGCAGCCTCACAGCAGCCTGACCAGCCAGTAGCTTGCCCTGTACAAGT  2738

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2739  GTCCAGTAGTAAAATTCTAAATGTAAGTAGAAATTTCTCTGCTTTTTAAAATAGTAGACTCAGATTACAGGCAT  2812

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2813  TTTTACTAAGTCATTACTGTGCAGTAATAAATGTTCTCTACAGTGAGTTTTATTAATAGAATGTTTTATATTAG  2886

Query  859  ------------------  858
                              
Sbjct 2887  ACAATAAATCTTTGCAAT  2904

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