Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12945
Subject:
XM_006497184.3
Aligned Length:
1566
Identities:
735
Gaps:
708

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTTCCCTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGCAGACACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGTAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCATTTCTCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATAATTGGAGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCTGACCACCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAGAGATGAGCCCTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCTAAACGAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATA  370

Query    1  -----------------------------------------------------------------------ATG  3
                                                                                   |||
Sbjct  371  CGAAGGACCTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATG  444

Query    4  TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT  77
            ||.|||||.||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.||
Sbjct  445  TCTTATAACATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTT  518

Query   78  ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG  151
            |||||||||||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|
Sbjct  519  ACACTGGAGTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGG  592

Query  152  AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAG  225
            ||||||||||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.
Sbjct  593  AAGTTCAAGAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAA  666

Query  226  ATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAA  299
            |||...|||||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.|||||
Sbjct  667  ATGAAAACAGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAA  740

Query  300  CCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGC  373
            |||||||||.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||
Sbjct  741  CCCAGTGGAGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGC  814

Query  374  CCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGT  447
            ||||.||.|||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||
Sbjct  815  CCAAGATCCCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGT  888

Query  448  GATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTT  521
            ||.|||||||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.
Sbjct  889  GACATTAAGCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTC  962

Query  522  CTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAA  595
            |||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  963  CTGTCCTATTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAA  1036

Query  596  AATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTA  669
            ||||.|||||||||||.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AATTAAATTATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTA  1110

Query  670  TCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGT  743
            |||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||
Sbjct 1111  TCTATTCCAATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGT  1184

Query  744  AGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGT  817
            ||||||.||||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.|||
Sbjct 1185  AGAAAAAACAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGT  1258

Query  818  CTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT---------------------------------  858
            |.||..||.||||||||..||||||.|||||||||||.|||                                 
Sbjct 1259  CCTCGCATCTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAG  1332

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1333  GTGACCACCTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGC  1406

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1407  TCAGGGGCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGC  1480

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1481  AAGACTTGTGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTC  1554

Query  859  ------------  858
                        
Sbjct 1555  AGGCTTGAGCTC  1566

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