Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12945
- Subject:
- XM_006497184.3
- Aligned Length:
- 1566
- Identities:
- 735
- Gaps:
- 708
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTCCCTATCCTCTAAAGAGTTTGGGTCGAGACTGGACCACGCCGTGGGAGGATCTACAGAAATATTGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCAGACACATTTCCAGTTGTCTGAGGTGGCCAGGACATTACTCCCGTGCGCCTTACCCATACTTCAGTAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCATTTCTCATTGAACTGTAGACCACCTTTTCTGTTTGAGTCTGGAACGCAGTTTCAGTACTATAATTGGAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTGACCACCTTAGCAACGCATCCTTGATCCATCTCTCTCGTCACGTCATGACCTCTGACAGAGATGAGCCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCTAAACGAAGAAAACATCAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATA 370
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 371 CGAAGGACCTAGAAGACAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATG 444
Query 4 TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT 77
||.|||||.||.||.||.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.||
Sbjct 445 TCTTATAACATCCTCTCGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTT 518
Query 78 ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG 151
|||||||||||||.||||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|
Sbjct 519 ACACTGGAGTTTTCGGTTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGG 592
Query 152 AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAG 225
||||||||||||||||||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.
Sbjct 593 AAGTTCAAGAAGATCATTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAA 666
Query 226 ATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAA 299
|||...|||||||||||.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.|||||
Sbjct 667 ATGAAAACAGGAAGGAAGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAA 740
Query 300 CCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGC 373
|||||||||.||||.|||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||
Sbjct 741 CCCAGTGGAGTTCTGCCGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGC 814
Query 374 CCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGT 447
||||.||.|||...|||||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||
Sbjct 815 CCAAGATCCCACGCGCTGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGT 888
Query 448 GATATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTT 521
||.|||||||||||.||..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.
Sbjct 889 GACATTAAGCTGACCCAGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTC 962
Query 522 CTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAA 595
|||.||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 963 CTGTCCTATTGTCATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAA 1036
Query 596 AATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTA 669
||||.|||||||||||.|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATTAAATTATGAAGGTCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTA 1110
Query 670 TCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGT 743
|||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||
Sbjct 1111 TCTATTCCAATTTGGCCCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGT 1184
Query 744 AGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGT 817
||||||.||||||||||||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.|||
Sbjct 1185 AGAAAAAACAGACAGTGATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGT 1258
Query 818 CTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT--------------------------------- 858
|.||..||.||||||||..||||||.|||||||||||.|||
Sbjct 1259 CCTCGCATCTACAGCACGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAG 1332
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1333 GTGACCACCTGCCATTCCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGC 1406
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1407 TCAGGGGCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGC 1480
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1481 AAGACTTGTGGACTGTGAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTC 1554
Query 859 ------------ 858
Sbjct 1555 AGGCTTGAGCTC 1566
