Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12945
• Subject: XM_006497186.2
• Aligned Length: 1254
• Identities: 735
• Gaps: 396

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAGGAACAATAAAAAGGAACTGGGAGTATTTATGTAGCCATAATAAAGAAAATACGAAGGACCTAGAAGA  74

Query    1  -------------------------------------------------------ATGTCCTATAATATACTTT  19
                                                                   |||||.|||||.||.||.|
Sbjct   75  CAGAAATGTTGACTCCACGTGTGAGGACCGTGAAGATAAGTTTGACTTCTCAGTGATGTCTTATAACATCCTCT  148

Query   20  CACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGG  93
            |.||.|||||||||||.||||||||||||||.||.|||||||||||.||.|||||.|||||||||||||||.||
Sbjct  149  CGCAGGATTTACTGGAGGATAACTCTCACCTCTACAGACATTGCCGACGTCCAGTGTTACACTGGAGTTTTCGG  222

Query   94  TTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCA  167
            ||.||||||||..||||||||||.|||||||||||||||||.||.||||||.|.||.|||||||||||||||||
Sbjct  223  TTCCCCAATATCTTGAAAGAAATCAAACATTTTGATGCAGATGTGCTTTGTCTACAGGAAGTTCAAGAAGATCA  296

Query  168  TTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGA  241
            ||||||..||||.||||||||||||.|||||||||||||||||||.|||||||||||.|||...||||||||||
Sbjct  297  TTATGGGACAGAAATCAGGCCAAGTCTGGAATCACTGGGTTATCATTGTGAATATAAAATGAAAACAGGAAGGA  370

Query  242  AACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTC  315
            |.||.||.||||||||.||.||||||||||||||||..||.||.|||||.||.||||||||||||||.||||.|
Sbjct  371  AGCCCGACGGCTGTGCCATCTGCTTCAAACATTCCAGGTTCTCGCTCTTATCTGTGAACCCAGTGGAGTTCTGC  444

Query  316  CGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGC  389
            ||||..||.|||.|||||.|||||||.|||||..|||||||.|||||||||.|.||||||||.||.|||...||
Sbjct  445  CGCCGCGACATTCCTCTGCTGGACAGGGACAACATTGGATTGGTTTTACTCCTGCAGCCCAAGATCCCACGCGC  518

Query  390  TGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGC  463
            |||||..||..|.||||||.||||.||.||.||||||.|.|||||||||.||||.|||||.|||||||||||.|
Sbjct  519  TGCCTCTCCATCCATCTGCATAGCTAACACACATCTGCTCTATAATCCACGGCGCGGTGACATTAAGCTGACCC  592

Query  464  AATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATG  537
            |..||||||||||.||.||.||||||.|||.|||..||||.|..|||||||||||||.|||.||||||||.|||
Sbjct  593  AGCTGGCAATGCTGCTAGCTGAGATTGCCAATGTGACCCATCGCAAAGATGGCAGCTCCTGTCCTATTGTCATG  666

Query  538  TGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGG  611
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||
Sbjct  667  TGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTCTATAGTTTCATAAAGGAAGGAAAATTAAATTATGAAGG  740

Query  612  ACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGC  685
            .|||.|.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTTGCAATTGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGC  814

Query  686  CCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGACAGACAGT  759
            |||||||||||||.|||||.|||||||||||.|||||||.|||||||||.||.|||||||||||.|||||||||
Sbjct  815  CCCCAAACCTAGGCATCTCTCAGAACTGTGTTTATGAGGCACAGCAGGTTCCCAAAGTAGAAAAAACAGACAGT  888

Query  760  GATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCA  833
            |||.||||.|||.||||||.|.||.||.|.|||||||.||||.|||||||.|||.||||.||..||.|||||||
Sbjct  889  GATGTGACTCAAGCACAGCAGGAGAAAGCGGAGGTCCCAGTGTCAGCTGACAAAGTGTCCTCGCATCTACAGCA  962

Query  834  CCATTTCAGTTTGTCATCTGTTTAT-------------------------------------------------  858
            |..||||||.|||||||||||.|||                                                 
Sbjct  963  CGGTTTCAGCTTGTCATCTGTCTATTCCCATTATGTTCCTGACACTGGAGTTCCAGAGGTGACCACCTGCCATT  1036

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1037  CCCGAAGTGCCATAACTGTTGATTATATTTTCTACACTGCAAAGAAGGAGAACACTGCTCAGGGGCCAGGAGCT  1110

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1111  GAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTAACAGAGCAAGACTTGTGGACTGT  1184

Query  859  ----------------------------------------------------------------------  858
                                                                                  
Sbjct 1185  GAACGGCCTTCCCAATGAGCACAACTCCTCAGATCACCTGCCTTTGCTGGCCAAGTTCAGGCTTGAGCTC  1254