Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12966
Subject:
XM_005271322.4
Aligned Length:
2028
Identities:
1661
Gaps:
366

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATGATATTTCCCAAAAGGCTGAGATTCTGCTTTCTTCATCTAAACCTGTCCCAAAAACCTATGTACCAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTTGGCAAGGGTGATGTAAAGGATAAGTTTGAAGCCATGCAGAGAGCCAGGGAAGAAAGAAATCAAAGGAGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTAGAGACGAAAAACAAAGAAGAAAAGAACAATATATTAGAGAGAGAGAATGGAACAGGAGAAAGCAGGAGATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGAAATGCTTGCTTCTGATGATGAGGAAGATGTATCTTCTAAAGTAGAAAAGGCTTATGTTCCAAAATTAAC  296

Query    1  ----------------------------ATGGAGAAACAAAGACAAGAGGAACAAAGGAAGAGAACGGAGGAGG  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGAACTGTGAAGGGTAGATTTGCTGAAATGGAGAAACAAAGACAAGAGGAACAAAGGAAGAGAACGGAGGAGG  370

Query   47  AACGAAAACGCAGAATTGAGCAGGATATGTTAGAAAAGAGGAAAATACAGCGTGAATTAGCAAAAAGGGCTGAA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACGAAAACGCAGAATTGAGCAGGATATGTTAGAAAAGAGGAAAATACAGCGTGAATTAGCAAAAAGGGCTGAA  444

Query  121  C------------------------------------------AGGAAGGAGATGATTCACTACTTATAACTGT  152
            |                                          |||||||||||||||||||||||||||||||
Sbjct  445  CAGATTGAGGACATAAACAATACGGGAACTGAATCAGCATCAGAGGAAGGAGATGATTCACTACTTATAACTGT  518

Query  153  GGTACCTGTCAAATCATATAAAACATCTGGAAAAATGAAAAAGAATTTTGAGGATCTAGAAAAAGAACGTGAAG  226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGTACCTGTCAAATCATATAAAACATCTGGAAAAATGAAAAAGAATTTTGAGGATCTAGAAAAAGAACGTGAAG  592

Query  227  AGAAAGAAAGGATCAAGTACGAGGAAGATAAAAGAATAAGATATGAAGAACAACGACCATCTCTCAAGGAAGCA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAAAGAAAGGATCAAGTACGAGGAAGATAAAAGAATAAGATATGAAGAACAACGACCATCTCTCAAGGAAGCA  666

Query  301  AAGTGTCTTTCATTAGTTATGGATGATGAAATAGAAAGTGAAGCAAAAAAAGAATCACTTTCTCCCAGAAAATT  374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  667  AAGTGTCTTTCATTAGTTATGGATGATGAAATAGAAAGTGAAGCAAAAAAAGAATCACTTTCTCCCGGAAAATT  740

Query  375  GAAACTAACTTTTGAAGAACTGGAGCGACAAAGACAAGAAAACCGAAAGAAGCAAGCTGAAGAGGAAGCAAGAA  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAACTAACTTTTGAAGAACTGGAGCGACAAAGACAAGAAAACCGAAAGAAGCAAGCTGAAGAGGAAGCAAGAA  814

Query  449  AACGTTTAGAAGAAGAGAAGCGTGCTTTTGAAGAAGCAAGGCGGCAAATGGTAAATGAAGATGAGGAAAACCAA  522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACGTTTAGAAGAAGAGAAGCGTGCTTTTGAAGAAGCAAGGCGGCAAATGGTAAATGAAGATGAGGAAAACCAA  888

Query  523  GACACAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAAACTCAGTTTTGAAGAAATGGAAAGGCAAAG  596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GACACAGCAAAAATTTTTAAAGGGTACCGCCCTGGTAAACTCAAACTCAGTTTTGAAGAAATGGAAAGGCAAAG  962

Query  597  AAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGAAGCCAGAAGGAGAATAGAGGAAGAAAAGAAGGCGTTTGCTG  670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAGAGAAGATGAAAAAAGGAAAGCAGAAGAAGAAGCCAGAAGGAGAATAGAGGAAGAAAAGAAGGCGTTTGCTG  1036

Query  671  AAGCAAGGAGAAATATGGTAGTAGATGATGACTCCCCAGAGATGTATAAGACAATCTCTCAAGAATTTCTTACA  744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGCAAGGAGAAATATGGTAGTAGATGATGACTCCCCAGAGATGTATAAGACAATCTCTCAAGAATTTCTTACA  1110

Query  745  CCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAAAATGGAAGAAGAAAAACGACGAACAGAGGA  818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCGGGAAAACTGGAAATTAATTTTGAAGAATTATTAAAACAAAAAATGGAAGAAGAAAAACGACGAACAGAGGA  1184

Query  819  GGAACGGAAGCATAAGCTAGAAATGGAGAAACAAGAATTTGAACAACTGAGACAGGAAATGGGAGAGGAAGAGG  892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GGAACGGAAGCATAAGCTAGAAATGGAGAAACAAGAATTTGAACAACTGAGACAGGAAATGGGAGAGGAAGAGG  1258

Query  893  AAGAAAATGAAACCTTTGGATTGAGCAGAGAATATGAAGAACTGATCAAATTAAAAAGGAGTGGCTCTATTCAA  966
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGAAAATGAAACCTTTGGATTGAGCAGAGAATATGAAGAACTGATCAAATTAAAAAGGAGTGGCTCTATTCAA  1332

Query  967  GCTAAAAACCTAAAAAGCAAGTTTGAAAAAATTGGACAGTTGTCTGAAAAAGAAATACAGAAAAAAATAGAAGA  1040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCTAAAAACCTAAAAAGCAAGTTTGAAAAAATTGGACAGTTGTCTGAAAAAGAAATACAGAAAAAAATAGAAGA  1406

Query 1041  AGAGCGAGCAAGAAGGAGAGCAATTGACCTTGAAATTAAAGAGCGAGAAGCTGAAAATTTTCATGAGGAAGATG  1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AGAGCGAGCAAGAAGGAGAGCAATTGACCTTGAAATTAAAGAGCGAGAAGCTGAAAATTTTCATGAGGAAGATG  1480

Query 1115  ATGTTGATGTTAGGCCTGCAAGAAAAAGCGAGGCTCCATTTACTCACAAAGTGAATATGAAAGCTAGATTTGAA  1188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATGTTGATGTTAGGCCTGCAAGAAAAAGCGAGGCTCCATTTACTCACAAAGTGAATATGAAAGCTAGATTTGAA  1554

Query 1189  CAAATGGCTAAGGCAAGAGAAGAAGAAGAACAAAGAAGAATTGAAGAACAAAAGTTACTACGCATGCAGTTTGA  1262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CAAATGGCTAAGGCAAGAGAAGAAGAAGAACAAAGAAGAATTGAAGAACAAAAGTTACTACGCATGCAGTTTGA  1628

Query 1263  ACAAAGGGAAATTGATGCAGCACTACAAAAGAAAAGAGAAGAGGAGGAGGAGGAAGAAGGTAGCATCATGAATG  1336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ACAAAGGGAAATTGATGCAGCACTACAAAAGAAAAGAGAAGAGGAGGAGGAGGAAGAAGGTAGCATCATGAATG  1702

Query 1337  GCTCCACTGCTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAGAAGCCTCTTAAAAACACATCA  1410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GCTCCACTGCTGAAGATGAAGAGCAAACCAGATCAGGAGCTCCATGGTTCAAGAAGCCTCTTAAAAACACATCA  1776

Query 1411  GTTGTAGACAGTGAGCCAGTCAGATTTACGGTTAAAGTAACAGGAGAACCCAAACCAGAAATTACATGGTGGTT  1484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTTGTAGACAGTGAGCCAGTCAGATTTACGGTTAAAGTAACAGGAGAACCCAAACCAGAAATTACATGGTGGTT  1850

Query 1485  TGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAATATATTGAAAGGGGAGAAACTTACTGCCTTTACTTAC  1558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TGAAGGAGAAATACTGCAGGATGGAGAAGACTATCAATATATTGAAAGGGGAGAAACTTACTGCCTTTACTTAC  1924

Query 1559  CAGAAACTTTCCCAGAAGATGGAGGAGAGTATATGTGTAAAGCAGTCAACAATAAAGGATCTGCAGCTAGTACC  1632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CAGAAACTTTCCCAGAAGATGGAGGAGAGTATATGTGTAAAGCAGTCAACAATAAAGGATCTGCAGCTAGTACC  1998

Query 1633  TGTATTCTTACCATTGAAACTGATGACTAC  1662
            ||||||||||||||||||||||||||||||
Sbjct 1999  TGTATTCTTACCATTGAAACTGATGACTAC  2028

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