Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12984
- Subject:
- XM_011518064.3
- Aligned Length:
- 5466
- Identities:
- 1368
- Gaps:
- 4092
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGACCATGGCACGACTGGAGGCGCCCCAGTGCCCCGGGTTCCTGGCCCGCCTCCTCGGTGGCACCTGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCTCTGTATCGCCGGACAGGTATGCGGAGACCAAAGCCAAGGGGCTGTTTTCCTGCGGGAATTTACACTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCGAAGAGAGAGCCTCCATGAAGATTTCCTGTCTGACCTCTTGAATAGTCACAAAACTGAAGACTCGAGTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGACCGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGGGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACAGAACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGTCAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGCCAAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATCTTTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGATAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCCGCAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCCTGATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTTTCCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTCACAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AACCCATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACATCGGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATCAAACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAATGCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGAGTGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCATCGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAATGCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTATAAACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGCTGCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCCAGGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGTGAAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACCCAGACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCACCAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGAGCCTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACGTCTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCCAAGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGTGTTCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTCCTGGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCCAGCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCATTTGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCTTCCTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATCGCGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTACCTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGAAGGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCTCAAGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCGGAGGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGCGGCCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCGGGGCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCGGAGAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCAGAGCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CCTCTCCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCCGCAGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CCTCATAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AAGGCCACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CCCACCTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCAC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCAAGGCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGATTCCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GATACGACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATC 3996
Query 1 ----------------------------------------------------------------ATGTG---TT 7
||||| .|
Sbjct 3997 AACACGGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAAT 4070
Query 8 TGACTG--ATGAGTGGGGTTTTTTGTTTTTTTTTTTCTTCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCA 79
..|||| | |||| ..||||||||||||||||||||||||||||||||
Sbjct 4071 CAACTGCCA-------GGTT--------------------GCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCA 4117
Query 80 GGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4118 GGAATAAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCG 4191
Query 154 GATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCT 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4192 GATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCT 4265
Query 228 AGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTT 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4266 AGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTT 4339
Query 302 CAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATC 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4340 CAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATC 4413
Query 376 AAAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCA 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4414 AAAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCA 4487
Query 450 TCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCC 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4488 TCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCC 4561
Query 524 TTGCCCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGAC 597
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4562 TTGCTCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGAC 4635
Query 598 AGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAG 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4636 AGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAG 4709
Query 672 CACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAG 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4710 CACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAG 4783
Query 746 ACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGC 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4784 ACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGC 4857
Query 820 AGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGC 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4858 AGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGC 4931
Query 894 CAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGT 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4932 CAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGT 5005
Query 968 GCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATC 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5006 GCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATC 5079
Query 1042 ACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAG 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5080 ACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAG 5153
Query 1116 TGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTG 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5154 TGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTG 5227
Query 1190 TGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAAC 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5228 TGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAAC 5301
Query 1264 TGGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAA 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5302 TGGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAA 5375
Query 1338 ACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5376 ACAGCTGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 5439
