Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12996
Subject:
XM_017016940.2
Aligned Length:
1977
Identities:
1956
Gaps:
18

Alignment

Query    1  ATGGAACTTGAAAATGATTATTGCTTGAATGATTACAACATTTCAGAAGGGTGGACCTTGAAGCTAGTTTTGGC  74
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct    1  ATGGAACTTGAAAATGATTATTGCTTGAATGATTACAACATTTCAGAAGGGTGTACCTTGAAGCTAGTTTTGGC  74

Query   75  TATGCGTGGCGGACCTATAAATACTAGAAGAGTTCCTACAGACGATCCACTTAGGACGATGGCAGAGTACTTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct   75  TATGCGTGGCGGACCTATAAATACTAGAAGAGTTCCTACAGACGATCCACTTAGGAAGATGGCAGAGTACTTGG  148

Query  149  ATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCAAACAAGTTACATTTTTGGTATACCAAGAAGGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCAAACAAGTTACATTTTTGGTATACCAAGAAGGA  222

Query  223  GATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGCACTTTAACACCGTTATCTGACTCTTCAAAGAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGCACTTTAACACCGTTATCTGACTCTTCAAAGAA  296

Query  297  AATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACATCGTATG------------------AGTGGTG  352
            |||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||
Sbjct  297  AATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACATCGTATGAGTTATTGTTTTCTTTGCAGTGGTG  370

Query  353  GTTCTATGTATAATTCAGATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGCAACAGATAATTGAA  426
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTTCTATGTATAATTCAGATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGCAACAGATAATTGAA  444

Query  427  AATTCAATAACTATGAATAAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTCAGCAAAAAGCCTAA  500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATTCAATAACTATGAATAAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTCAGCAAAAAGCCTAA  518

Query  501  GAAAGCTGTCAAGATAAAACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCACTGCACCATCTCGCC  574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAAAGCTGTCAAGATAAAACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCACTGCACCATCTCGCC  592

Query  575  ACCGATTGTTAAGGGTCCTCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATGCATATCCGCCCGAA  648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACCGATTGTTAAGGGTCCTCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGGAATGCATATCCGCCCGAA  666

Query  649  ATCTCCAGGAATGGAATTTCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCTTCTATCACTGGTGA  722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATCTCCAGGAATGGAATTTCAAGTTTGGCAACTCAACTCTCTGCTGAGAGATACATATCTTCTATCACTGGTGA  740

Query  723  ATTTCTTAAGGAAGATAATAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGTCAAACTACCTCCTC  796
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTTCTTAAGGAAGATAATAGCTGGGAGAATAACACACTGTCTCACTTCAGTAGCAACGTCAAACTACCTCCTC  814

Query  797  AGATACCCCATTTGGAGTTGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTGGATCATCCCTGCCT  870
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGATACCCCATTTGGAGTTGGGAAATGACCAGGAGCTTGCTGACTCTGTTCTCCATCTTGGATCATCCCTGCCT  888

Query  871  AGGCAAACAAAACATTTTTTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCTTCAGAAGAATGTGT  944
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGCAAACAAAACATTTTTTAGGAAACTTGCCATCTAGTAATGGGAACATTGTCTTACCTTCAGAAGAATGTGT  962

Query  945  AACCGAACAATCACTTCTACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGCTGATGAACAGAGCA  1018
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AACCGAACAATCACTTCTACCTAAAGTGGGCTCACTGGCTTCATTTGCAGAAGGAAATGCTGATGAACAGAGCA  1036

Query 1019  GCGGCTTAGAAGGTGCGTGCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAGGGTTGAAAGCTCCA  1092
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCGGCTTAGAAGGTGCGTGCAAAGTGAATCTGGAGTTGCTACTCACTAATGCTGACAAAGGGTTGAAAGCTCCA  1110

Query 1093  GAGCAGCATCTCAAGCATGTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTTCTTAACTACCGGGA  1166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAGCAGCATCTCAAGCATGTTGCAGGAGTGCTGAATGGGGAATCAGTAGAGACTTCAGTTCTTAACTACCGGGA  1184

Query 1167  ATTAAGTCCTCACAAGAATAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCTACATAATTCTCTGG  1240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATTAAGTCCTCACAAGAATAGACTCTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCTACATAATTCTCTGG  1258

Query 1241  TGAAACCAGAGAGACAGTCCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTCAGTCACTGGATGTT  1314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAAACCAGAGAGACAGTCCAAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTCAGTCACTGGATGTT  1332

Query 1315  CAAAACATAACTGATTCTTCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGATTCGCTTGGGAAAAG  1388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1333  CAAAACATAACTGATTCTTCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGATTCACTTGGGAAAAG  1406

Query 1389  ATCTGATGTTATTTCCAAAGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTCCAAAGAGCCTGTTG  1462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ATCTGATGTTATTTCCAAAGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTCCAAAGAGCCTGTTG  1480

Query 1463  GTTGTGTAAATAATATCAGTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGATTACAGAGCACACGT  1536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GTTGTGTAAATAATATCAGTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGATTACAGAGCACACGT  1554

Query 1537  GGGGCAGGCAGGCTTCAGAACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAGGAAGAAAACTTTAG  1610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGGGCAGGCAGGCTTCAGAACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAGGAAGAAAACTTTAG  1628

Query 1611  GAAAAGTTCTCCCCAGTTAGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAATGAATGGAAATAATG  1684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GAAAAGTTCTCCCCAGTTAGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAATGAATGGAAATAATG  1702

Query 1685  CAGCAGCAGGGAAAAGCGTAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCCCTCTTCAGACAAAG  1758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CAGCAGCAGGGAAAAGCGTAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCCCTCTTCAGACAAAG  1776

Query 1759  AAGAAAACAACAAATCATTGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTACGAATGCAGATGTGG  1832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGAAAACAACAAATCATTGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTACGAATGCAGATGTGG  1850

Query 1833  AAACAACTTCTGTGCATCTCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAAGAGTGCAGGGAGGA  1906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AAACAACTTCTGTGCATCTCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTACAAGAGTGCAGGGAGGA  1924

Query 1907  GATACTTGCACGAGGCAAATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  1959
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GATACTTGCACGAGGCAAATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATC  1977

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