Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13007
• Subject: NM_031998.3
• Aligned Length: 1127
• Identities: 776
• Gaps: 232

Alignment

Query    1  ATGTCCCTCCGGAGGCACATTGGGAACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCA  74
            |||||...||||||||||||||||||.|||||||||||||..|.|.|||||||||||||||||||.||.||.||
Sbjct    1  ATGTCTGCCCGGAGGCACATTGGGAATCCTGAGTATCTGACCAGACGGATACCACAGAACCCAAGGTATCAACA  74

Query   75  TATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAAGAAAAATT  148
            |.||||.|||||||||||.|||||||||||.|||||.|||||.|.|||||||||.|||||||||||.|||||||
Sbjct   75  TGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGAAGCTAGAAGAGATTAAAAAAAATT  148

Query  149  ATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCT  222
            |||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||.|||||.|||
Sbjct  149  ATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCATTCAAGTCGCT  222

Query  223  TCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCTTC  296
            |||||.||.||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||||.||||
Sbjct  223  TCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATTCTGCAACTTC  296

Query  297  AGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGC  370
            |||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.|||||||..|
Sbjct  297  AGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCC  370

Query  371  AGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTGTTGGGGAA  444
            |||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||.|||||||||
Sbjct  371  AGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGGCGTTGGGGAA  444

Query  445  CTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTT  518
            ||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|||||.|||||
Sbjct  445  CTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGACTGTCCCTT  518

Query  519  CCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTG  592
            |||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.||||||||||||||.||||
Sbjct  519  CCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGTTACCCCATTG  592

Query  593  CAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCAAGATCATC  666
            |||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||||||||||||
Sbjct  593  CAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGGCAAGATCATC  666

Query  667  ATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCT  740
            ||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.|||||||||||
Sbjct  667  ATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTTGAAAACCT  740

Query  741  CTTCATGCTTTCCGGAG---------------------------------------------------------  757
            |||||||||||||||.|                                                         
Sbjct  741  CTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAG  814

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  815  CCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGCCCTGCCAGCT  888

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  889  GAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACCAGGGACCAGC  962

Query  758  -----------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGCCCGAAGCGCT  819
                       |||||||||||||...||||||..|.||||.|||.||.||||||.||| .||||    |||.|
Sbjct  963  AGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCC----GCGGT  1032

Query  820  ---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC  886
               |||||.|||    |||    ||.|.||.|||||||||||.|.|||||||.|.||||.|||.||||||||||
Sbjct 1033  GGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGC  1102

Query  887  AAGGCAAACCCTGGAAG  903
            |||||||||||||||||
Sbjct 1103  AAGGCAAACCCTGGAAG  1119