Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13007
• Subject: XM_006505207.3
• Aligned Length: 1137
• Identities: 771
• Gaps: 246

Alignment

Query    1  AT-GTCCCTCCGGAG-GCACATTGGGAACC-----CTG---AGTATCTGATGAAAAGGATACCACAGAACCCAA  64
            || ||||||    || .||.||.|..||||     |||   |||||||||..|.|.||||||||||||||||||
Sbjct    1  ATGGTCCCT----AGTTCAAATAGCCAACCTCACTCTGAGAAGTATCTGACCAGACGGATACCACAGAACCCAA  70

Query   65  GATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATT  138
            |.||.||.|||.||||.|||||||||||.|||||||||||.|||||.|||||.|.|||||||||.|||||||||
Sbjct   71  GGTATCAACATGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGAAGCTAGAAGAGATT  144

Query  139  AAGAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCAT  212
            ||.||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||
Sbjct  145  AAAAAAAATTATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCAT  218

Query  213  CCAAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATT  286
            .|||||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct  219  TCAAGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATT  292

Query  287  CTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG  360
            |||||.|||||||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.
Sbjct  293  CTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCC  366

Query  361  AGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG  434
            |||||||..||||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||
Sbjct  367  AGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGG  440

Query  435  TGTTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTG  508
            .|||||||||||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|
Sbjct  441  CGTTGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGG  514

Query  509  ACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGT  582
            ||||.||||||||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.|||||||||
Sbjct  515  ACTGTCCCTTCCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGT  588

Query  583  TACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGG  656
            |||||.|||||||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||
Sbjct  589  TACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGG  662

Query  657  CAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT  730
            ||||||||||||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.|
Sbjct  663  CAAGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGT  736

Query  731  TTGAAAACCTCTTCATGCTTTCCGGAG-----------------------------------------------  757
            |||||||||||||||||||||||||.|                                               
Sbjct  737  TTGAAAACCTCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGT  810

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  811  TCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGC  884

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  885  CCTGCCAGCTGAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACC  958

Query  758  ---------------------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGC  809
                                 |||||||||||||...||||||..|.||||.|||.||.||||||.||| .|||
Sbjct  959  AGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGC  1032

Query  810  CCGAAGCGCT---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGT  876
            |    |||.|   |||||.|||    |||    ||.|.||.|||||||||||.|.|||||||.|.||||.|||.
Sbjct 1033  C----GCGGTGGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGC  1098

Query  877  GGTCACCTGCAAGGCAAACCCTGGAAG  903
            |||||||||||||||||||||||||||
Sbjct 1099  GGTCACCTGCAAGGCAAACCCTGGAAG  1125