Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13007
• Subject: XM_006505208.3
• Aligned Length: 1135
• Identities: 763
• Gaps: 254

Alignment

Query    1  ATGTCCCTCCGGAGGCACATTG--------GGAACCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGA  66
            ||||      |||     |.||        |.|||   .|||||||||..|.|.|||||||||||||||||||.
Sbjct    1  ATGT------GGA-----AATGTTTTGATAGAAAC---AAGTATCTGACCAGACGGATACCACAGAACCCAAGG  60

Query   67  TACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATACTGAGAAGCTCGAAGAGATTAA  140
            ||.||.|||.||||.|||||||||||.|||||||||||.|||||.|||||.|.|||||||||.|||||||||||
Sbjct   61  TATCAACATGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGAAGCTAGAAGAGATTAA  134

Query  141  GAAAAATTATAGATACAAAAAAGATGAGCTTTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCC  214
            .||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||.||||.|
Sbjct  135  AAAAAATTATAGATACAAAAAAGATGAACTTTTCAAGAGACTAAAAGTTACCACTTTTGCCCAGCTGGTCATTC  208

Query  215  AAGTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCT  288
            ||||.||||||||.||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||
Sbjct  209  AAGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAATGATTCT  282

Query  289  GCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAG  362
            |||.|||||||..||||||||||||...||||||.|||.|||||||||||.|..||.|..||.|||||.||.||
Sbjct  283  GCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAG  356

Query  363  CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGGTG  436
            |||||..||||||||.||||.|.|.|||||||||||||||||||||||.|||||.|||||.|||||||||||.|
Sbjct  357  CCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGGCG  430

Query  437  TTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC  510
            ||||||||||||||.||||||||||||..||.|||||||.|||.|||.||..|||||||||.||||||||.|||
Sbjct  431  TTGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGAC  504

Query  511  TGCCCCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTGTTGGAGCTTACAGTTA  584
            ||.||||||||||||||||||||.||.||.|||||||||||.||||||||.||||||||.||.|||||||||||
Sbjct  505  TGTCCCTTCCTGCTGCTAGATGTTCGAGACAGAGATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGTTA  578

Query  585  CCCAATTGCAACTCTGTCTAGAACAATGAACCCTTATTCAAATGATATTCTTGAATATAAAAATGCCCATGGCA  658
            |||.|||||||||||.||.||.|||||||||||.|||||||||||.||||||||.||.||.||.|||||.||||
Sbjct  579  CCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGGCA  652

Query  659  AGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTT  732
            ||||||||||..|.||.|||||.||.||.|||||||||||.||||||||||||||||||||.||||||||.|||
Sbjct  653  AGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTT  726

Query  733  GAAAACCTCTTCATGCTTTCCGGAG-------------------------------------------------  757
            |||||||||||||||||||||||.|                                                 
Sbjct  727  GAAAACCTCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGTTC  800

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  801  CCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGCCC  874

Query  758  --------------------------------------------------------------------------  757
                                                                                      
Sbjct  875  TGCCAGCTGAGAACAAGTGGAGATTTACCCCAGAAGACTTAAAAAAGATAGAATGTTACCTGGAAGAGGACCAG  948

Query  758  -------------------GCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTG-GTGCCC  811
                               |||||||||||||...||||||..|.||||.|||.||.||||||.||| .|||| 
Sbjct  949  GGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCC-  1021

Query  812  GAAGCGCT---CAGAATCTG----CCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGG  878
               |||.|   |||||.|||    |||    ||.|.||.|||||||||||.|.|||||||.|.||||.|||.||
Sbjct 1022  ---GCGGTGGCCAGAACCTGCCCACCA----GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGG  1088

Query  879  TCACCTGCAAGGCAAACCCTGGAAG  903
            |||||||||||||||||||||||||
Sbjct 1089  TCACCTGCAAGGCAAACCCTGGAAG  1113