Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13013
- Subject:
- XM_011542566.2
- Aligned Length:
- 2109
- Identities:
- 915
- Gaps:
- 1179
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGCGCTGTCCTGGCCCTGGGCCCGCCTGGAAGACCCGCCTGTGTCGCGGGCCCCCTCCCTGGCTCTGGCC 74
Query 1 --------------------------------ATGAAGTCC-------CCG-------CCCC------------ 16
.||.||.|| ||| ||||
Sbjct 75 TCTAAAGCGCCCCCGGCACAGCTTCCCGGCCCTTGCAGCCCGGTGGGGCCGGAACCTTCCCCTTGTCACTGTTG 148
Query 17 TCC---------TCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCA 81
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCCTTTCTCCTTTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCA 222
Query 82 GGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAA 296
Query 156 TTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTA 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTA 370
Query 230 AGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGG 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGG 444
Query 304 GAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAA 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAA 518
Query 378 CCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCG 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCG 592
Query 452 CAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCCCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCC 525
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCC 666
Query 526 AGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTA 740
Query 600 TTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGG 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGG 814
Query 674 AGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGG 888
Query 748 ATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGC 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGC 962
Query 822 CATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGGGAGCCAGTATA------- 888
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||| |||
Sbjct 963 CATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAG-----ATAAGCCCCT 1031
Query 889 ---GATGCAGGACTGCT-------CT-------CAGATGCCTC-----ACAAGCAGCA---------------- 924
|||...|||.|.|| || |||||| |.|||||.||
Sbjct 1032 TCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATG----GGGAGATAAGCACCATGTTAAAGATGCAAAG 1101
Query 925 ----------------------ACTTCTTC-----------CTCCTTA-------------------------- 939
|.|||.|| ||||||.
Sbjct 1102 GAGGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAAC 1175
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1176 CAACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTATGATG 1249
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1250 CAGTGCTCACGGAGGCTGGAGATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCAGCA 1323
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1324 ACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCTCCC 1397
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1398 GCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTCCCA 1471
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1472 TAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTCCGT 1545
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1546 GCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAAGGA 1619
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1620 CCTGCACATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTCAATTTTT 1693
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1694 CATGGCAAATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTT 1767
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1768 ACCATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGA 1841
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1842 CAGCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCC 1915
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1916 TGCTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAG 1989
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1990 AAAACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTGTTTGAGAAGATGATGAG 2063
Query 940 ------------------------------------- 939
Sbjct 2064 TGGCTCAGATATCAAATCTACAGACAAGCCCACGCTG 2100
