Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13013
- Subject:
- XM_011542568.2
- Aligned Length:
- 2109
- Identities:
- 879
- Gaps:
- 1215
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCGCGCTGTCCTGGCCCTGGGCCCGCCTGGAAGACCCGCCTGTGTCGCGGGCCCCCTCCCTGGCTCTGGCC 74
Query 1 --------------------------------ATGAAGTCC-------CCG-------CCCC------------ 16
.||.||.|| ||| ||||
Sbjct 75 TCTAAAGCGCCCCCGGCACAGCTTCCCGGCCCTTGCAGCCCGGTGGGGCCGGAACCTTCCCCTTGTCACTGTTG 148
Query 17 TCC---------TCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCA 81
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCCTTTCTCCTTTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCA 222
Query 82 GGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGTTTTGCTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAA 296
Query 156 TTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTA 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTGGTCTCATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTA 370
Query 230 AGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGG 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCCCCACTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGG 444
Query 304 GAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAA 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGTACTGGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAA 518
Query 378 CCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCG 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTGCATGAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCG 592
Query 452 CAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCCCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCC 525
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 593 CAGAGATCGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCC 666
Query 526 AGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTGGCTCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTA 740
Query 600 TTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGG 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTTGACCACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGG 814
Query 674 AGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGG 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAATGAGTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGG 888
Query 748 ATTGTGGAGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGC 821
||||||||||||||||||||||||||| |||||||||||
Sbjct 889 ATTGTGGAGCTTCTCTTGACCTCTGAT------------------------------------GTGTTGGCCGC 926
Query 822 CATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGGGAGCCAGTATA------- 888
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||| |||
Sbjct 927 CATCAATTTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAG-----ATAAGCCCCT 995
Query 889 ---GATGCAGGACTGCT-------CT-------CAGATGCCTC-----ACAAGCAGCA---------------- 924
|||...|||.|.|| || |||||| |.|||||.||
Sbjct 996 TCTGATTATGGAATACTGGGTCGGCTGGTTCGACAGATG----GGGAGATAAGCACCATGTTAAAGATGCAAAG 1065
Query 925 ----------------------ACTTCTTC-----------CTCCTTA-------------------------- 939
|.|||.|| ||||||.
Sbjct 1066 GAGGTTGAACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAAC 1139
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1140 CAACTTTGGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTATGATG 1213
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1214 CAGTGCTCACGGAGGCTGGAGATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCAGCA 1287
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1288 ACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCTCCC 1361
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1362 GCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTCCCA 1435
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1436 TAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTCCGT 1509
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1510 GCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAAGGA 1583
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1584 CCTGCACATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTCAATTTTT 1657
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1658 CATGGCAAATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTT 1731
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1732 ACCATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGA 1805
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1806 CAGCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCC 1879
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1880 TGCTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAG 1953
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1954 AAAACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTGTTTGAGAAGATGATGAG 2027
Query 940 ------------------------------------- 939
Sbjct 2028 TGGCTCAGATATCAAATCTACAGACAAGCCCACGCTG 2064
