Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13013
- Subject:
- XR_002957120.1
- Aligned Length:
- 2532
- Identities:
- 915
- Gaps:
- 1602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCCGGGCCGCGCCACCAAGCCCGCTGTCCCCAGCTTTCCTCGGCAGATCCCCTGGCTACCCCCACCCTGCGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCCGTTCACCAGATGCCAGAAAATCAGGGTGGGGCACGCAGGCCAGGGGCTCCAGCGGCTGGGCACCGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCCCGAACCTGGTGCTGGAAGTGCGCCCGCCTCCGCCTCTCCCAGGCACCCACCGGCACTGCCCAGCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTGGAGGGTCTAGGACTGAACGTCTGTCCCCGGCCTTCATCCTGGCTGCAGAGGACTGGCCGGGTGATGCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGTCCTGGCCCTGGGCCCGCCTGGAAGACCCGCCTGTGTCGCGGGCCCCCTCCCTGGCTCTGGCCTCTAAAG 370
Query 1 -------------------------ATGAAGTCC-------CCG-------CCCC------------TCC---- 19
.||.||.|| ||| |||| |||
Sbjct 371 CGCCCCCGGCACAGCTTCCCGGCCCTTGCAGCCCGGTGGGGCCGGAACCTTCCCCTTGTCACTGTTGTCCTTTC 444
Query 20 -----TCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCAGGTTTTG 88
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCTTTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCAGGTTTTG 518
Query 89 CTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAATTGGTCT 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAATTGGTCT 592
Query 163 CATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTAAGCCCCA 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTAAGCCCCA 666
Query 237 CTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGGGAGTACT 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGGGAGTACT 740
Query 311 GGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAACCTGCAT 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAACCTGCAT 814
Query 385 GAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCGCAGAGAT 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCGCAGAGAT 888
Query 459 CGGGCTGTGGGTGATTCTGCGTCCAGGCCCCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCCAGCTGGC 532
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCCAGCTGGC 962
Query 533 TCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTATTTTGAC 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTATTTTGAC 1036
Query 607 CACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGGAGAATGA 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGGAGAATGA 1110
Query 681 GTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG 1184
Query 755 AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT 1258
Query 829 TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGGGAGCCAGTATA----------GATG 892
||||||||||||||||||||||||||||||||||||||||||||||||.||| ||| |||.
Sbjct 1259 TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAG-----ATAAGCCCCTTCTGATT 1327
Query 893 CAGGACTGCT-------CT-------CAGATGCCTC-----ACAAGCAGCA----------------------- 924
..|||.|.|| || |||||| |.|||||.||
Sbjct 1328 ATGGAATACTGGGTCGGCTGGTTCGACAGATG----GGGAGATAAGCACCATGTTAAAGATGCAAAGGAGGTTG 1397
Query 925 ---------------ACTTCTTC-----------CTCCTTA--------------------------------- 939
|.|||.|| ||||||.
Sbjct 1398 AACATGCTGTGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCAACTTT 1471
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1472 GGTTTCATGAACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTATGATGCAGTGCT 1545
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1546 CACGGAGGCTGGAGATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCAGCAACTCCCC 1619
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1620 TGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCTCCCGCTGTGG 1693
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1694 GACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTCCCATAAACAA 1767
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1768 TGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTCCGTGCCCACG 1841
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1842 CTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAAGGACCTGCAC 1915
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1916 ATTCCTGAACTCAGGGACTGCCGATACCTGAGGATCCTGGTGGAGAATCAAGGACGAGTCAATTTTTCATGGCA 1989
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1990 AATACAGAATGAGCAGAAAGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTTACCATCT 2063
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2064 ATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGACAGCCAC 2137
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2138 CAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCCTGCTGAA 2211
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2212 CTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAGAAAACAC 2285
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2286 TGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTATGTCACTCCAGTCTCTGCCTTGAGATCTCA 2359
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2360 TAAACTTTCAGATCAAAATGTGTAACATCTGCAACATCTAAACTTAACAACAACCATGCAACATATCCATTTTA 2433
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2434 CAGATGAGAAACCAAGGTTCAAAGAGTGAGTACAGTCGTCCTGCAGCATCCGTGGGGGACCAGTTCCACCATCT 2507
Query 940 ---------------- 939
Sbjct 2508 ACTATGGATACCGAAA 2523
