Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13014
- Subject:
- XR_947791.2
- Aligned Length:
- 2954
- Identities:
- 444
- Gaps:
- 2490
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCCGGGCCGCGCCACCAAGCCCGCTGTCCCCAGCTTTCCTCGGCAGATCCCCTGGCTACCCCCACCCTGCGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCCGTTCACCAGATGCCAGAAAATCAGGGTGGGGCACGCAGGCCAGGGGCTCCAGCGGCTGGGCACCGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCCCGAACCTGGTGCTGGAAGTGCGCCCGCCTCCGCCTCTCCCAGGCACCCACCGGCACTGCCCAGCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCTGGAGGGTCTAGGACTGAACGTCTGTCCCCGGCCTTCATCCTGGCTGCAGAGGACTGGCCGGGTGATGCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGTCCTGGCCCTGGGCCCGCCTGGAAGACCCGCCTGTGTCGCGGGCCCCCTCCCTGGCTCTGGCCTCTAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCCCCCGGCACAGCTTCCCGGCCCTTGCAGCCCGGTGGGGCCGGAACCTTCCCCTTGTCACTGTTGTCCTTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTTTCAGCCCGTGTCTCTCCTGGAAGAGAATGGCGGGCATCTTTTTCCTGCCATTTATCTCATCAGGTTTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCTCGGTTTAAGCAGGAAGAGAACTTCATGCTTGGAAGAGCGCATCCGTCCCAGCCTAGGTTTAATTGGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATCTGACCCCTCTGGAGCTGAAGAATCGATCTGTGGGACTTGGAACTGAAAGCACAGGTCGGGGTAAGCCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTCACACTGGAGGGCCACAAGTTCCTGATCTTCGGGGGCTCCATCCACTATTTCCGGGTGCCCAGGGAGTACT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGGGACCGCCTGCTGAAGCTGAAGGCCTGTGGCTTCAATACTGTCACCACCTATGTTCCGTGGAACCTGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCCAGAAAGAGGCAAATTTGACTTCTCTGGGAACCTGGACCTGGAGGCCTTCGTCCTGATGGCCGCAGAGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGGCTGTGGGTGATTCTGCGTCCAGGCCGCTACATCTGCAGTGAGATGGACCTCGGGGGCTTGCCCAGCTGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCTGCAAGACCCCCGGTTACTGTTGAGGACAACCAACAAGAGCTTCATTGAAGCAGTTGAGAAGTATTTTGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCTGATTCCCAGAGTGATTCCTCTCCAGTACCGCCAGGCAGGCCCTGTCATCGCGGTGCAAGTGGAGAATGA 1110
Query 1 -------------------------------ATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTATGGCTCATTCAATAAGGATAAAACATACATGCCGTATCTCCACAAGGCCCTGCTGAGAAGAGGGATTGTGG 1184
Query 44 AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTTCTCTTGACCTCTGATGGTGAGAAACATGTGCTGAGTGGCCACACCAAAGGAGTGTTGGCCGCCATCAAT 1258
Query 118 TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCCCTTCTGATTATGGA 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTGCAAAAACTTCACCAGGATACTTTCAATCAGCTTCATAAAGTCCAGAGAGATAAGCCCCTTCTGATTATGGA 1332
Query 192 ATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGAGGTTGAACATGCTG 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATACTGGGTCGGCTGGTTCGACAGATGGGGAGATAAGCACCATGTTAAAGATGCAAAGGAGGTTGAACATGCTG 1406
Query 266 TGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCAACTTTGGTTTCATG 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGTCTGAATTCATCAAATATGAGATCTCCTTCAATGTATATATGTTCCATGGTGGAACCAACTTTGGTTTCATG 1480
Query 340 AACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGGCAAGTGTCGCTGGTGTAGTAGCCT 413
|||||||||||||||||||||||||||||||||||||||||||||||||.|.| ||.||.||| .||
Sbjct 1481 AACGGGGCCACATATTTCGGGAAGCACTCGGGCATTGTCACCAGCTATGACTA-------TGATGCAGT--GCT 1545
Query 414 CTCCAGCATGGGCGGTGCTGGGGCTTTACAGAG----------GAGGCTCCGGAAGC-CTGT---TCTG----- 468
|.| ||.| |||||.| .|||||.|| ||.|||.|..||.| ||.| ||||
Sbjct 1546 CAC-------GGAG--GCTGGAG-ATTACACAGAAAAATATCTGAAGCTTCAAAAACTCTTTCAATCTGTCTCA 1609
Query 469 GCA---CCACT-----GGGTTCT--------------------------------------------------- 483
||| ||.|| |.||.|.
Sbjct 1610 GCAACTCCCCTGCCCCGAGTACCCAAACTTCCTCCCAAGGCTGTGTATCCCCCCGTGAGACCGTCGCTGTACCT 1683
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1684 CCCGCTGTGGGACGCCCTATCCTACTTAAATGAGCCAGTCAGGTCGCGTCAGCCCGTCAACATGGAGAACCTTC 1757
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1758 CCATAAACAATGGGAGCGGCCAGTCCTACGGGCTTGTCCTGTATGAGAAGTCCATCTGCTCCGGAGGCCGCCTC 1831
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1832 CGTGCCCACGCTCATGACGTGGCACAGGTGTTTTTGGATGAGACAATGATAGGGATTCTGAATGAGAATAATAA 1905
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1906 GGACCTGCACATTCCTGAACTCAGGGAATAACTGGATCTGTCAGCATCAATAACTCTTCCCTGGAGGGCTTTAC 1979
Query 484 -------------------------------------------------------------------------- 483
Sbjct 1980 CATCTATTCCCTGGAGATGAAAATGAGCTTCTTTGAGAGGCTCCGCTCTGCCACCTGGAAGCCTGTCCCAGACA 2053
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2054 GCCACCAGGGCCCGGCCTTCTACTGTGGGACCTTGAAGGCTGGCCCTTCTCCCAAGGACACCTTCCTGAGCCTG 2127
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2128 CTGAACTGGAATTATGGATTTGTGTTCATCAATGGACGTAACCTTGGGCGATATTGGAATATTGGGCCTCAGAA 2201
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2202 AACACTGTACCTTCCTGGAGTTTGGCTTCATCCAGAAGACAATGAGGTCATCTTGTTTGAGAAGATGATGAGTG 2275
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2276 GCTCAGATATCAAATCTACAGACAAGCCCACGCTGTAAAACTGTGTCTGAACATTTTTTTTTTTTTTTGAGATG 2349
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2350 GAGTCTCACTTTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAAGCTCAGCCTCTCGGGTT 2423
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2424 CACGCCATTCTCCTGCCTCAGCCTCCCCAGCAGCTGGGACTACAGGTGCACGCCACCACGCCTGGCTAATTTTT 2497
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2498 TGTATTTTTAGTAGAGATGGGGTTTCACCAAGTTAGCCAGGATGGTCCCAATCTCCTGACCTTGTGATCTGCTC 2571
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2572 TCCTCAGCCTCCCAAAGTACTGGGATTACAGGCGTGAGCCACCACTCCCGGCCGTGAACATATTTTTTGGGTTG 2645
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2646 CTGGAGTTCATCTATAAGTCATTTTTGAGGAATAAGATTTATGTTAAGACTATCAAACACAGTGTTGCCTACAA 2719
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2720 TAGCAAAAATGTGAAAATAACAACAACAACAAAACAGCAGAGGAATTGTTATGTATTTTGTAGTCTATCTATAT 2793
Query 484 -------------------------------------------------------------------------- 483
Sbjct 2794 GATGCCTATTTTTAGGCTTTAAAAAGTCTTCAAAATCTTTAATGACTGATTTATCTAGTTAAATGCTTAATCCT 2867
Query 484 -------------------------------------------------------------------- 483
Sbjct 2868 TAGCAGGCTCTTATTCTTTAATTAAACGTGCCTTTGAGTAGATGTGAATAAAATAAAAACAAGTTTCA 2935
