Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13020
- Subject:
- NM_001024526.2
- Aligned Length:
- 2172
- Identities:
- 997
- Gaps:
- 1065
Alignment
Query 1 ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAAT 74
||||||||.|||||.| ||||..||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTGCTCTTCGTTG---AGGTGACATCTAAAGGCACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAAT 71
Query 75 TGCTCCTGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACAT 148
|.||.||||||||.|.||||.| ||||.||.|||||||..||||||||||||||..|||||.||||
Sbjct 72 TCCTTCTGGAAATCCGGATGGC---------ACTCCTGTAACTGAACCCTCTTGGCATGAAACTGCAGCCACAT 136
Query 149 CAGGTGCTCATCCTGAGGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCA 222
|.||..||||.||||||||..||.||||.||.|||||||||||.|||||.|||||||||||||||||||||.||
Sbjct 137 CTGGATCTCACCCTGAGGGCCATACAGAACTTTCAGAAGATATGTGTAAGGAATATGAAGTAATGTATTCTCCA 210
Query 223 TCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCT 296
|||||||||||||||||.||||||.|||...|||||||.|||.|||||||.|||||.||||||||.|||||.||
Sbjct 211 TCTTGTGAAACCACAAGGAATACTGCAGATGTTGAAGAGTCAGCTGATGGAATGATCTTAGGACCGGAAGACCT 284
Query 297 GAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGA 370
||||||||||.|.|||||||||||.||||||||||.|||||||.|||||||||||||..|||||||||||||||
Sbjct 285 GAGTTACCAACTCTATGATGTTTCTGGAGAAAGCAGTTCAGCAATTTCTACAGAAGATTTAAAAGAATGTCTGA 358
Query 371 AGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGT 444
|.||||||||.|||||||||||.||||||||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct 359 AAAAACAATTGGAATTCTGTTTCTCACGAGAAAATTTATCAAAGGACCTTTACTTGATATCTCAAATGGATAGT 432
Query 445 GATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAAT 518
|||||||||.|||||||.|||||.||||||||||||||||||||.|||||.|||||||||.|..|.|||.||||
Sbjct 433 GATCAGTTCGTCCCAATATGGACGGTTGCCAACATGGAAGAAATTAAAAAATTGACTACAAATACAGATTTAAT 506
Query 519 TCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAGTGAGACCAAGTCATAAGC 592
|||||||||.||.||||||||.||.|||||||||||||||||||||||.||.||.|||||||||||||||||||
Sbjct 507 TCTTGAAGTATTGAGATCTTCCCCTATGGTACAAGTTGATGAGAAGGGAGAAAAGGTGAGACCAAGTCATAAGC 580
Query 593 GTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAAGGTTTGTTCAAAAGTGAA 666
|.||||||||.|||||.||||||||||||||.|||||.||..|||||||||||||||.||||||.||||.||||
Sbjct 581 GATGTATTGTGATTCTCAGAGAGATTCCTGAGACAACGCCTGTAGAGGAAGTGAAAGCTTTGTTTAAAAATGAA 654
Query 667 AACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCACTTTCCAGTCAGACACAGA 740
||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||
Sbjct 655 AACTGCCCCAAAGTGATAAGCTGTGAGTTTGCGCACAACAGCAACTGGTACATCACTTTCCAGTCAGACACAGA 728
Query 741 TGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGCCAATTATGGCAAGGATAA 814
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 729 TGCACAGCAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGCCAATCATGGCAAGGATAA 802
Query 815 AAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATCTATAGTCACCCCATTCAA 888
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.|||.||.|||||.
Sbjct 803 AAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATGTATACTCAACCTATTCAG 876
Query 889 ACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCAACAGTACTCGGTCTATAG 962
||||...|.||.|||.||||.||||||||.|||||.||.||.||||||||| ||.||||||||.||.|||||
Sbjct 877 ACTCCTACCCAATATCCCTCACCAGTCTTCATGCAACCAGTGTATAATCCT---CAGCAGTACTCAGTGTATAG 947
Query 963 TATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCCCTTTCCCAATGGTA 1036
|.||||||||||||||||||||||||.||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 TCTTGTGCCTCAGTCTTGGTCTCCAAGTCCTGCACCTTACTTTGAAACACCACTGGCTCCCTTTCCCAATGGTA 1021
Query 1037 GTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTCGACCATT- 1109
||||||||||||||||||.|||.|||||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 1022 GTTTTGTGAATGGCTTTAGTTCACCAGGATCTTACAAAACAAATGCTGCTGCTATGAATATGGGCCGACCATTC 1095
Query 1110 CCAAAAAATCGTG------------------------------------------------------------- 1122
|||||||||||||
Sbjct 1096 CCAAAAAATCGTGTGAAGCCTCATTTTAGGTCATCCAGTGGTTCAGAACACTCAACAGAGGGCTCCGTGTCATT 1169
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1170 GGGGGATGGACCACTGAGCAGATCTAGTTCAAGGATCTTTCTTTCTGAACGGCATAACCCAACAGTAACAGGGC 1243
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1244 AGCAGGAACAAACTTATCTTCCAAAGGAGGCTCCCATTTTACAGATGGAACAGAATGGGGACTTTGGAAGAGGC 1317
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1318 AGGCGAACTCTCTTCAGAGGCCGAAGGCGAAGGGATGATGACAGGATCCCAAGACCCCAACCTGCAGCAACTGA 1391
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1392 AGCCAAGGCTCCAACTCCGAAGTTTGATTTGCTTGCTACAAATTTCCCTCCTTTACCTGGAAGCTCATCGAGAG 1465
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1466 TGCCAGATGAACTTGGTTTGGAGAACAGAATGTCTGATGTCGTTAAAGGTGTCTGCAGAGAAAAGGACAGCGAG 1539
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1540 GACGTGCGAGTTAGTTGCCCAGTGCCTGCAGAGGACGGACAGACAGACTGCACTTCTGCGCCGCTCAGCATAAG 1613
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1614 TCCTAGTCCTCCGTGTACAGCTGAGCCTCCTGTGTTAAGCACGACTCAGCAAGAGCAGGATCAGATGGAGGACT 1687
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1688 CTGCTGTTCCAAAGGACACTCTCAACCCAGTAGCTGTGCCAGTGTCTTCTCCAACTGCCACAAAGCCATCCCCG 1761
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1762 GCAAACACGGCTTCACCTTGCACTAGTAACATAAACCCACCGAGAGCTGTGGCCCTGCAGGAACCTCGAAAGTT 1835
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1836 AAGCTATGCTGAAGTGTGCCAGAAGCCTCCTAAAGAGCCATCTCCAGTTCTCGTACAGCCGCTGCGGGAACTCC 1909
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1910 GGTCTAATGCAGTATCCCCCACCAGAAATGAAGAGAACGGAGCTCCCGAGAAGCCTGTTGAGAAGCCGCATGAG 1983
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 1984 AAACCAGAAACAAGGGCTAGTAAGGATCATTCTGGCTTCCGAGGCAACACTATTCCCAGGGGAGCGGCTGGAAA 2057
Query 1123 -------------------------------------------------------------------------- 1122
Sbjct 2058 AATCAGGGAACAGAGACGCCAGTTCAGCCATAGGGCTACACCTCAGGGAGTGACTCGACGTAATGGGAAAGAGC 2131
Query 1123 -------------------------- 1122
Sbjct 2132 AATACGTGCCACCCAGATCACCAAAG 2157
