Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13021
Subject:
NM_001330415.2
Aligned Length:
2190
Identities:
564
Gaps:
1626

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTCCTGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGTGCTCATCCTGAGGTGTCTGTCTTTAATACAGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATAT  222

Query    1  ------ATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGAT  68
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGTAATGTATTCTTCATCTTGTGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTGATGGGATGAT  296

Query   69  TTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAG  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTCCGGAGAAAGCAATTCAGCAGTTTCTACAGAAG  370

Query  143  ACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTG  216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAGAAAATTTGTCAAAGGATCTTTACTTG  444

Query  217  ATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGAC  290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATGGAAGAAATAAAAAAGTTGAC  518

Query  291  TACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAG  364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGAGAAGGGTGAGAAAG  592

Query  365  TGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAA  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGGAAGTGAAA  666

Query  439  GGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCAC  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATCAC  740

Query  513  TTTCCAGTCAGACACAGATGCACAACAGGCTTTT--ATACTTAAGAGAAGAAGT--------------------  564
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||                    
Sbjct  741  TTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGC  814

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct  815  CAATTATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATC  888

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct  889  TATAGTCACCCCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCA  962

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct  963  ACAGTACTCGGTCTATAGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGG  1036

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1037  CTCCCTTTCCCAATGGTAGTTTTGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATG  1110

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1111  AATATGGGTCGACCATTCCAAAAAAATCGTGTGAAGCCTCAGTTTAGGTCATCTGGTGGTTCAGAACACTCAAC  1184

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1185  AGAGGGCTCTGTATCCTTGGGGGATGGACAGTTGAACAGATATAGTTCAAGAAACTTTCCAGCTGAACGGCATA  1258

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1259  ACCCCACAGTAACTGGGCATCAGGAGCAAACTTACCTTCAGAAGGAGACTTCCACTTTGCAGGTGGAACAGAAT  1332

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1333  GGGGACTATGGTAGGGGCAGGAGAACTCTCTTCAGAGGTCGAAGACGACGAGAAGATGACAGGATCTCAAGACC  1406

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1407  TCATCCTTCAACAGCTGAATCAAAGGCTCCAACACCAAAGTTTGACTTATTAGCCTCAAATTTTCCACCTTTAC  1480

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1481  CTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGAGAATAGGATGTCTGATGTTGTTAAAGGTGTCTAC  1554

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1555  AAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTGCAGATGAGCAGACAGAATGCACTTCTGC  1628

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1629  CCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCATTAAGCACAACTCAGCAAGAAA  1702

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1703  AGGATCTAATAGAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACCAGTTTCTCCTCCAAGT  1776

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1777  ACTACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAGCTGTGGCTCT  1850

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1851  ACAGGAACCCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTTGTGC  1924

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1925  AGCCACTACGGGAACTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCC  1998

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 1999  GTTGAGAAACCACATGAGAAGCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCC  2072

Query  565  --------------------------------------------------------------------------  564
                                                                                      
Sbjct 2073  CAGGGGAGCAGCAGGAAAAATCAGGGAACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTC  2146

Query  565  --------------------------------------------  564
                                                        
Sbjct 2147  GACGTAATGGCAAAGAGCAATATGTGCCACCCAGATCACCAAAG  2190

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