Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13037
- Subject:
- NM_001323264.1
- Aligned Length:
- 1878
- Identities:
- 974
- Gaps:
- 894
Alignment
Query 1 ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCCAGAGGCTCTGCCACTCCGAATCTCACAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGT---GACTATTTCCGGGCAATGTTCAGTCTT 219
||| .|| || ||||||||||||||||
Sbjct 1 -------------------------------------ATG-GGTATAGA---------GGCAATGTTCAGTCTT 27
Query 220 TGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGA 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28 TGTATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGA 101
Query 294 GTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTAC 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 102 GTTTGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTAC 175
Query 368 AGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGAATTAAATAGCTTTAATTACTTGGATCTG 441
|||||||||||||||||||||||||||||||||||||||||
Sbjct 176 AGCTGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATC--------------------------------- 216
Query 442 TACAGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAGTGATCGATTTCTTAGTGAAACATCTCTC 515
Sbjct 217 -------------------------------------------------------------------------- 216
Query 516 TGAACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCCCTATTGCCTGCTTCAGGAGGTGCTGAAGAGCG 589
Sbjct 217 -------------------------------------------------------------------------- 216
Query 590 ACCGCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTAC 663
|||||||||||||||||||||||||||||||||||||||
Sbjct 217 -----------------------------------CAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTAC 255
Query 664 CAGTACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 256 CAGTACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCT 329
Query 738 GTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 GTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCA 403
Query 812 TCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGT 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 TCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGT 477
Query 886 GGGAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GGGAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT 551
Query 960 AGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGG 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 AGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGG 625
Query 1034 GGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGT 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 626 GGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGT 699
Query 1108 CGCTATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGG 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 CGCTATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGG 773
Query 1182 TGCCATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGAT 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TGCCATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGAT 847
Query 1256 ATTGCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTG 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 ATTGCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTG 921
Query 1330 GCTGATGGTCTTCTTTGGATATCAGGTAG---AAC--ATAC--CTCATGTTGGATTTATCAAAACACACTTTCA 1396
|||||||||||||||||||||||||||.| ||| |||| |.|| .|||||.||||..| |.|
Sbjct 922 GCTGATGGTCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACA--------ATATCAGAACAGGC--TAA 985
Query 1397 TTGTGGTATATATT------------------------------------------------------------ 1410
|.||| |||.
Sbjct 986 TGGTG-----TATGAACCTAACCAGAATAAGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATT 1054
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1055 CCATGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTT 1128
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1129 GTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATTTCAACCTGCTGACTGGCCA 1202
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1203 AAATGAATCTGGAGTTGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGC 1276
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1277 CTCTGGCTTGTATCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCTATGGGCCTACACTCCCT 1350
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1351 TTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCA 1424
Query 1411 ---------------------------- 1410
Sbjct 1425 AGTGCCTCATCACAGGATTGGCACCATC 1452
