Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13086
- Subject:
- XM_011537918.2
- Aligned Length:
- 3371
- Identities:
- 1339
- Gaps:
- 2026
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCTCCCTCACCGCATACGACAAAGATGTGAGCAGCGGAAGTTATAACCTTTCCTCTGCAACGACGGGCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTACTACAGTTGTGTCAGCCAGATCACCATAGGTTATGACGTTGCGGGGCCTGTGGCAATTGGGCTTACCCACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAAATCCATACGTACAAGGCAGACCAACCCTCCCATCAGATCTGCCTCTCTTCGTCTCCAAAGATGCAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCCCTGTGTACCACCGATCCTTCACCCGCAAGACTGACCAGGCCACACCTTTGTCCTGTCCAGCCTCACTGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCACTCCAGTGCCTTCTTACAGCAGTAGCAGCCAGGAAACCCTGAGTCAAGACACAACAGGTTTAAGTTTAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTATTCATGGGGCTGAAAAGCGTTTGCAAATCCATCAACGGCGAAGTGTGGCAAGCCGCCCAGCGTCACGTCGT 444
Query 1 ------------------------------------------------------ATGGAGGCAAGCTCTTCTGG 20
||||||||||||||||||||
Sbjct 445 CGCCTGCCTGTGGTCAGGCATTCCTCACTCCCACCAGGCAGAAGGTCAATAAAAATGGAGGCAAGCTCTTCTGG 518
Query 21 AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGTGGATTTGCAAGGCTACCAGCTGGATATGC 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AATCACTAATGGAAAAACCAAAGTCTTCCACCCAGAAGGAGGTGTGGATTTGCAAGGCTACCAGCTGGATATGC 592
Query 95 AAATACTACCTGACGGGCCAAAGAGTGATGTGGACTTTTCAGAGATTCTTAATGCAATACAAGAAATGGCCAAG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAATACTACCTGACGGGCCAAAGAGTGATGTGGACTTTTCAGAGATTCTTAATGCAATACAAGAAATGGCCAAG 666
Query 169 GATGTCAATATTCTTTTTGATGAATTAGAAGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCTTCTTCACCC 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATGTCAATATTCTTTTTGATGAATTAGAAGCTGTCAGCAGTCCTTGCAAAGATGACGATTCTCTTCTTCACCC 740
Query 243 TGGAAACCTGACTAGTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGGGAGAGACAGTGCCAGAAAGAAACA 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGAAACCTGACTAGTACTTCAGATGATGCCAGCAGATTGGAAGCCGGGGGAGAGACAGTGCCAGAAAGAAACA 814
Query 317 AATCAAATGGACTTTACTTTCGAGATGGAAAGTGTCGAATTGACTACATCCTTGTGTACAGAAAATCCAACCCC 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AATCAAATGGACTTTACTTTCGAGATGGAAAGTGTCGAATTGACTACATCCTTGTGTACAGAAAATCCAACCCC 888
Query 391 CAGACTGAAAAGAGAGAAGTATTTGAAAGAAACATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTCCTCTCT 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGACTGAAAAGAGAGAAGTATTTGAAAGAAACATTAGAGCAGAAGGATTGCAAATGGAGAAAGAGTCCTCTCT 962
Query 465 AATAAATAGTGACATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGAAGATATGCAGAACAAATGA 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AATAAATAGTGACATTATCTTTGTGAAGTTGCATGCCCCATGGGAAGTCCTTGGAAGATATGCAGAACAAATGA 1036
Query 539 ATGTAAGAATGCCTTTCAGGAGAAAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAA 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGTAAGAATGCCTTTCAGGAGAAAAATCTATTACCTGCCCCGCCGTTACAAGTTCATGAGCAGGATCGATAAA 1110
Query 613 CAAATAAGCAGGTTTCGGAGATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAAATAAGCAGGTTTCGGAGATGGTTACCTAAGAAGCCAATGAGGCTGGACAAGGAGACACTGCCAGACCTGGA 1184
Query 687 GGAGAATGACTGCTACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGT 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGAGAATGACTGCTACACTGCCCCTTTCAGCCAGCAAAGGATCCATCACTTCATCATACACAACAAAGAAACGT 1258
Query 761 TCTTCAACAATGCCACAAGAAGTAGAATCGTGCATCACATTTTACAAAGAATAAAATATGAAGAAGGAAAAAAC 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCTTCAACAATGCCACAAGAAGTAGAATCGTGCATCACATTTTACAAAGAATAAAATATGAAGAAGGAAAAAAC 1332
Query 835 AAGATTGGTCTGAATCGTTTGCTTACCAATGGCTCCTATGAAGCTGCGTTTCCCCTGCATGAGGGAAGTTATAG 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGATTGGTCTGAATCGTTTGCTTACCAATGGCTCCTATGAAGCTGCGTTTCCCCTGCATGAGGGAAGTTATAG 1406
Query 909 AAGTAAAAACTCCATTCGAACCCATGGAGCAGAAAACCACCGACATCTACTCTATGAGTGCTGGGCCTCCTGGG 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGTAAAAACTCCATTCGAACCCATGGAGCAGAAAACCACCGACATCTACTCTATGAGTGCTGGGCCTCCTGGG 1480
Query 983 GCGTGTGGTATAAATACCAACCTTTGGATCTTGTAAGGCGGTACTTTGGAGAGAAGATTGGGTTATATTTTGCC 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCGTGTGGTATAAATACCAACCTTTGGATCTTGTAAGGCGGTACTTTGGAGAGAAGATTGGGTTATATTTTGCC 1554
Query 1057 TGGTTGGGCTGGTACACCGGCATGCTCTTCCCAGCTGCCTTCATTGGATTGTTTGTCTTTTTGTATGGCGTCAC 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGGTTGGGCTGGTACACCGGCATGCTCTTCCCAGCTGCCTTCATTGGATTGTTTGTCTTTTTGTATGGCGTCAC 1628
Query 1131 CACTCTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCATCATGTGTCCTGTGTGTGATA 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CACTCTGGATCACAGCCAAGTCAGTAAAGAAGTCTGCCAAGCTACAGATATCATCATGTGTCCTGTGTGTGATA 1702
Query 1205 AATACTGTCCATTCATGAGGCTGTCAGACAGCTGTGTATATGCCAAGGTAACCCACCTTTTTGACAATGGAGCC 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AATACTGTCCATTCATGAGGCTGTCAGACAGCTGTGTATATGCCAAGGTAACCCACCTTTTTGACAATGGAGCC 1776
Query 1279 ACTGTCTTCTTTGCTGTTTTCATGGCAGTCTGGGCAACAGTTTTCCTGGAGTTTTGGAAAAGACGGCGAGCAGT 1352
||||||||||||||||||||||||||||||||||
Sbjct 1777 ACTGTCTTCTTTGCTGTTTTCATGGCAGTCTGGG---------------------------------------- 1810
Query 1353 AATTGCTTATGACTGGGATTTGATAGACTGGGAAGAAGAGGAGGAAGAAA---TACGACCC----CAG-TTTGA 1418
||||||..|| |||| ||| |.|.|||| ||| |.||.
Sbjct 1811 ------------------------AGACTGTCAA----AGGA-----AAATTGTCCCACCCATCACAGCTCTGT 1851
Query 1419 AGCCAAGTATTCCAAGAAAGAGCGGATGAATCCAATTTCTGGAAAGCCAGAACCTTATCAAGCATTTACAGATA 1492
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1493 AATGCAGCAGACTTATCGTTTCTGCATCTGGAATATTTTTTATGATCTGCGTGGTGATTGCTGCCGTGTTCGGG 1566
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1567 ATCGTCATTTACCGGGTGGTGACTGTCAGCACTTTCGCTGCCTTTAAGTGGGCGTTAATCAGGAATAACTCTCA 1640
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1641 GGTTGCAACCACAGGGACTGCTGTGTGCATCAACTTCTGTATCATTATGTTGCTGAATGTGCTCTATGAAAAAG 1714
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1715 TTGCCCTGCTTCTGACGAATTTAGAACAGCCTCGCACAGAGTCTGAGTGGGAGAACAGCTTCACCCTGAAAATG 1788
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1789 TTTCTTTTTCAGTTTGTCAATCTGAACAGCTCCACATTTTACATCGCATTCTTCCTCGGAAGATTTACAGGACA 1862
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1863 CCCAGGTGCCTACTTGAGGCTGATAAACAGGTGGAGACTAGAAGAGTGCCACCCTAGTGGATGCCTTATTGATC 1936
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 1937 TGTGTATGCAAATGGGTATTATAATGGTGCTAAAGCAGACCTGGAATAATTTCATGGAACTTGGCTACCCGTTA 2010
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2011 ATTCAGAATTGGTGGACTAGAAGAAAAGTACGACAAGAACATGGACCTGAAAGGAAAATAAGTTTCCCACAATG 2084
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2085 GGAAAAGGACTATAACCTTCAGCCGATGAATGCCTATGGACTCTTCGATGAATACTTAGAAATGATTCTTCAGT 2158
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2159 TTGGATTCACAACTATCTTTGTGGCAGCTTTTCCCCTAGCACCACTTCTGGCCTTACTGAATAACATAATTGAA 2232
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2233 ATTCGACTTGATGCTTACAAATTTGTCACACAGTGGAGGAGACCTTTAGCTTCAAGGGCCAAAGACATAGGAAT 2306
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2307 TTGGTATGGAATTCTTGAAGGCATTGGAATTCTCTCTGTTATCACAAATGCATTTGTCATAGCGATAACATCTG 2380
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2381 ACTTTATCCCTCGCTTGGTGTATGCTTATAAGTATGGACCTTGTGCAGGCCAAGGAGAAGCTGGGCAAAAGTGC 2454
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2455 ATGGTTGGCTATGTGAATGCCAGCTTGTCTGTATTTCGAATTTCTGACTTTGAGAACCGATCTGAGCCTGAATC 2528
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2529 TGATGGCAGTGAGTTCTCGGGGACTCCTCTTAAGTACTGCAGATACCGGGACTACCGTGACCCGCCTCATTCAC 2602
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2603 TGGTGCCCTATGGCTACACACTGCAGTTTTGGCATGTCCTAGCTGCTCGATTAGCTTTTATCATTGTCTTTGAG 2676
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2677 CACCTCGTGTTTTGTATAAAGCACCTCATTTCATATCTGATCCCAGACCTCCCAAAAGACCTAAGGGATCGAAT 2750
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2751 GAGAAGAGAGAAGTACTTGATTCAGGAGATGATGTATGAAGCAGAACTGGAACGTCTCCAGAAGGAACGAAAGG 2824
Sbjct 1852 -------------------------------------------------------------------------- 1851
Query 2825 AGAGGAAGAAGAATGGAAAAGCACACCACAACGAGTGGCCG 2865
Sbjct 1852 ----------------------------------------- 1851
