Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13145
- Subject:
- XM_006529298.3
- Aligned Length:
- 2660
- Identities:
- 1496
- Gaps:
- 940
Alignment
Query 1 ---------------------ATGAACCTCCGGTCCCTGGGGACCCACAGAGGTGTGTCTGCTGTGGCTGGTCC 53
.|||||||.|||||.|.||||||||.||||||||||||..||||||.|||.||
Sbjct 1 ATGAACCATCCTGACTACAAGCTGAACCTTCGGTCTCCGGGGACCCCCAGAGGTGTGTCCTCTGTGGTTGGCCC 74
Query 54 ACATGACATTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATAT 127
...||...||||||||||||||||||||||||||||||||||||.|||||..||||||||||||||||||||||
Sbjct 75 GAGTGCTGTTGGTGCTTCGCCAGGTGACAAAAAGTCAAAGAACAAGTCCATGCGAGGGAAGAAAAAGAGCATAT 148
Query 128 TTGAAACTTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGA 201
|||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 149 TTGAAACCTACATGTCCAAGGAGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTTATCCAGGGTGTATTGAGA 222
Query 202 ATTAATCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACATTTTTATTGATGGGGT 275
||.||.||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||
Sbjct 223 ATCAACCCAAAGAAGTTTCATGAAGCCTTCATTCCTTCTCCGGATGGTGATCGGGACATTTTTATTGATGGAGT 296
Query 276 TGTTGCTCGTAATAGAGCCTTAAATGGGGATCTGGTGGTCGTGAAACTGCTTCCCGAGGAGCATTGGA------ 343
||||||||||||||||||||||||||||||.||.|||||.||.|||||||||||.|||||.||.||||
Sbjct 297 TGTTGCTCGTAATAGAGCCTTAAATGGGGACCTTGTGGTTGTAAAACTGCTTCCTGAGGATCAGTGGAAGCCAA 370
Query 344 ------------------------------------AGGTAGTTAAACCAGAGAGCAATGACAAAGAAACAGAA 381
|||.|||||||||||||||||||||||||||||.||||
Sbjct 371 GGATAACCTTGTCTCTGCCTGGAGTGCTGGGATTACAGGCAGTTAAACCAGAGAGCAATGACAAAGAAATAGAA 444
Query 382 GCTGCGTATGAATCAGATATCCCCGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTCCCTGAAAAGCTATAA 455
|||.|.||||||.|.||.|||||.||.|||..|||||||||.||.|.||.|||.|||||||.||||.|||..|.
Sbjct 445 GCTACTTATGAAGCTGACATCCCTGAAGAGGGCTGTGGACATCACCCCCTGCAGCAGTCCCGGAAAGGCTGGAG 518
Query 456 TGACAGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGGCATCACACAAA 529
|| ||||||||||||||.||||||||||||||||||.||||||||||||||||.|||||||||.||| ||
Sbjct 519 TG---GTCCTGATGTCATTATAGAGGCTCAGTTTGATGACAGCGACTCAGAAGATAGACATGGCAACAC-CA-- 586
Query 530 ATGTG--CTGGTTGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCTGAGAAAGGAAGAGAGGATGGTGATGCAC 601
||| |||||||||||||||||||||.|.|||.|.|.|..|.||||.|.|||||.|||.|||..|..|.|.|
Sbjct 587 --GTGGCCTGGTTGATGGTGTTAAGAAATTGTCAATCTCTACTCCTGACAGAGGAAAAGAAGATTCTAGTACTC 658
Query 602 CGGTTACAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGCTTTATCGGAGAAATCCCTGCAAAGATCA 675
|.||||..||||||||||.||||..|||..||||.||||||||||..|||||.|||||.||.||.||.|.||||
Sbjct 659 CAGTTATGAAAGATGAGAACACCCCCATACCACAGGACACAAGAGGCTTATCAGAGAAGTCACTTCAGAAATCA 732
Query 676 GCAAAGGTGGTTTACATCTTGGAGAAAAAACATTCTCGAGCAGCAACCGGCTTCCTCAAACTCTTGGCTGATAA 749
|||||||||||||||||||||||||||||.|||||||||||||||||.|||.||||.|||||||||||||||||
Sbjct 733 GCAAAGGTGGTTTACATCTTGGAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAACTCTTGGCTGATAA 806
Query 750 GAACAGCGAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTTATGTGCCTC 823
||||||.||.|||||||.|||||||||||||||||||||.||||||||||||||.|||||||||||.||.||||
Sbjct 807 GAACAGTGACCTGTTTAAGAAATACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAATTTACGTACCTC 880
Query 824 TCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGCCGCATTGTG 897
||||||||||||||||||||||..||.|.||.||||||||.|.|||||||||.|||||||||||||||||..|.
Sbjct 881 TCAAGGACTGTCCCCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGTTCATCTGCCGCATCATA 954
Query 898 GACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATTGAGCC 971
|||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||
Sbjct 955 GACTGGAAGGAGGACTGTAATTTTGCCCTGGGGCAACTGGCTAAGAGTCTTGGGCAGGCTGGTGAAATCGAGCC 1028
Query 972 TGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTCTAGAATGTCTTC 1045
||||||||||||.|||||.|||||.|||||.|||||.||||||||||||||||||||||||||.||||||||.|
Sbjct 1029 TGAAACAGAAGGGATACTGACAGAATATGGTGTGGACTTCTCTGATTTCTCTTCAGAAGTTCTTGAATGTCTCC 1102
Query 1046 CTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAGAAAAGACTGTATCTTC 1119
|||||.|||||||.||||||||.|||||.||.|||.|..||||||||||.||..||||.|||||||||||||||
Sbjct 1103 CTCAAAGCCTGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGACTGTATCTTC 1176
Query 1120 ACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGGCAACTTCAA 1193
||||||||.||||||||.||.||.|||||.||||||||||||.||||||.||..|||.||||.||||.||||.|
Sbjct 1177 ACCATTGATCCATCAACTGCTCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGGCACCTTCGA 1250
Query 1194 AGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGGCTGCCGAGA 1267
||||||.||.|||||.||.||.|||||||||||||||||.||||||||...|.||||||||||.|||||.||||
Sbjct 1251 AGTGGGCGTCCACATCGCCGATGTGAGTTACTTTGTTCCTGAGGGATCCTCTTTGGATAAAGTAGCTGCTGAGA 1324
Query 1268 GGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGCTGTGTGAGGAGCTGTGCAGC 1341
|.||.|||||.||||||||||| ||||
Sbjct 1325 GAGCCACAAGTGTCTACTTGGT-----------------------CCAG------------------------- 1350
Query 1342 CTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGATCCTTGATGA 1415
|||||||||||.||
Sbjct 1351 ------------------------------------------------------------AAGATCCTTGAAGA 1364
Query 1416 ATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCATGATTGAAAGCC 1489
.|||||||||||.||.||||||||.||.|||||||||||.||||||||.|||||.|||||||||||.||||..|
Sbjct 1365 GTGGTTTGGCCGCACTATCATCCGTTCTTGCACCAAACTGAGCTACGACCATGCCCAGAGCATGATCGAAAATC 1438
Query 1490 CAACTGAGAAAATCCCTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATAGCAGCGAGGAGGTACACCAGGCC 1563
||||||||||.|||||||.|.|||||||.|||||.|||||.||||||||.|||..|||||||||.||||||||.
Sbjct 1439 CAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTGCACCAGGCA 1512
Query 1564 GTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCGTTTGGATCA 1637
|||.||||.||.|||.|.|||||.|||||..|.||||..|||||||||||.||.||||||||.|||||.|||||
Sbjct 1513 GTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCGTTTAGATCA 1586
Query 1638 GCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATGAGTACCGCGAGA 1711
|||.|||||||||||.|||||||||||.|||||.|||.||||||||||||||||.||||||||||||||.||.|
Sbjct 1587 GCTGAAGCTTGCTTTTACTCTGGACCATGAGACTGGACTGCCTCAAGGATGTCACATCTATGAGTACCGAGACA 1660
Query 1712 GCAACAA------------------------------------------------------------------- 1718
|||||||
Sbjct 1661 GCAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCTTCCGCACCTTCCCT 1734
Query 1719 ------GCCCTGCTGCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGGTGGAATTCTGCGACCA 1786
|||||||||||||||||.|||||.||.||.||.|.|||||||||||||||||||||.|||||.|||||
Sbjct 1735 GAGCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAGTTCTGTGACCA 1808
Query 1787 GATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCC------------------------ 1836
|||||||||||||.||||..|||||||.|||||.|||||.||||||||||
Sbjct 1809 GATGGGGCTGCCCATGGATGTCAGCTCTGCAGGGGCCCTAAATAAAAGCCTGACTAAGACATTTGGAGATGACA 1882
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1883 AGTACTCTCTGGCCCGGAAGGAGGTGCTCACCAACATGTACTCCCGGCCCATGCAGATGGCACTGTACTTCTGC 1956
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1957 TCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCATTATGCTCTCAACGTTCCCCTCTACACACACTTCACCTC 2030
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2031 TCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGCTGCTCTGGGCTACAGTGAACAGCCAG 2104
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2105 ATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAACGTGTGCAG 2178
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2179 GAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTCCGAAGCCATGGTGAT 2252
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2253 GGGTGTCCTGAACCAAGCTTTCGACGTGCTGGTGCTGCGCTTTGGGGTGCAGAAGCGCATCTACTGCAATGCAC 2326
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2327 TGGCCCTGCGATCCTACAGCTTCCAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAGCCTGATGAC 2400
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 2401 CTTGAAGAGGAGCCAACACAGCAGGTCATCACCATCTTCAGCCTGGTGGATGTGGTCCTGCAGGCAGAGGCCAC 2474
Query 1837 ---------------------------------------------------------------------- 1836
Sbjct 2475 AGCCCTCAAGTACAGTGCTATCCTGAAGCGACCAGGCCTGGAGAAGGCGTCTGATGAGGAGCCTGAGGAC 2544
