Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13145
- Subject:
- XM_030252497.1
- Aligned Length:
- 2595
- Identities:
- 976
- Gaps:
- 1473
Alignment
Query 1 ATGAACCTCCGGTCCCTGGGGACCCACAGAGGTGTGTCTGCTGTGGCTGGTCCACATGACATTGGTGCTTCGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGTGACAAAAAGTCAAAGAACAGGTCCACACGAGGGAAGAAAAAGAGCATATTTGAAACTTACATGTCCAAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGATGTTTCAGAAGGCTTGAAGAGAGGAACACTCATCCAGGGTGTATTGAGAATTAATCCAAAGAAGTTTCAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGCCTTCATTCCTTCCCCGGATGGTGATCGAGACATTTTTATTGATGGGGTTGTTGCTCGTAATAGAGCCTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAATGGGGATCTGGTGGTCGTGAAACTGCTTCCCGAGGAGCATTGGAAGGTAGTTAAACCAGAGAGCAATGACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGAAACAGAAGCTGCGTATGAATCAGATATCCCCGAGGAGCTCTGTGGACACCATCTCCCGCAACAGTCCCTG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAAAGCTATAATGACAGTCCTGATGTCATTGTAGAGGCTCAGTTTGATGGCAGCGACTCAGAAGATGGACATGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CATCACACAAAATGTGCTGGTTGATGGTGTTAAGAAACTCTCAGTTTGTGTTTCTGAGAAAGGAAGAGAGGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTGATGCACCGGTTACAAAAGATGAGACCACCTGCATTTCACAAGACACAAGAGCTTTATCGGAGAAATCCCTG 666
||| ||||||||||.||||..|||..||||.||||||||||..|||||.|||||.||.||.
Sbjct 1 ---ATG-----------AAAGATGAGAACACCCCCATACCACAGGACACAAGAGGCTTATCAGAGAAGTCACTT 60
Query 667 CAAAGATCAGCAAAGGTGGTTTACATCTTGGAGAAAAAACATTCTCGAGCAGCAACCGGCTTCCTCAAACTCTT 740
||.|.|||||||||||||||||||||||||||||||||.|||||||||||||||||.|||.||||.||||||||
Sbjct 61 CAGAAATCAGCAAAGGTGGTTTACATCTTGGAGAAAAAGCATTCTCGAGCAGCAACTGGCATCCTGAAACTCTT 134
Query 741 GGCTGATAAGAACAGCGAACTGTTTAGGAAATACGCCCTGTTTTCTCCCTCAGACCACCGAGTGCCTAGAATTT 814
|||||||||||||||.||.|||||||.|||||||||||||||||||||.||||||||||||||.||||||||||
Sbjct 135 GGCTGATAAGAACAGTGACCTGTTTAAGAAATACGCCCTGTTTTCTCCTTCAGACCACCGAGTACCTAGAATTT 208
Query 815 ATGTGCCTCTCAAGGACTGTCCCCAGGACTTTGTGGCACGGCCTAAAGATTATGCCAACACACTGTTCATCTGC 888
|.||.||||||||||||||||||||||||||..||.|.||.||||||||.|.|||||||||.||||||||||||
Sbjct 209 ACGTACCTCTCAAGGACTGTCCCCAGGACTTCATGACCCGACCTAAAGACTTTGCCAACACGCTGTTCATCTGC 282
Query 889 CGCATTGTGGACTGGAAGGAGGACTGCAATTTTGCCCTGGGGCAGCTGGCTAAGAGTCTTGGGCAGGCTGGTGA 962
|||||..|.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 283 CGCATCATAGACTGGAAGGAGGACTGTAATTTTGCCCTGGGGCAACTGGCTAAGAGTCTTGGGCAGGCTGGTGA 356
Query 963 AATTGAGCCTGAAACAGAAGGAATACTAACAGAGTATGGCGTGGATTTCTCTGATTTCTCTTCAGAAGTTCTAG 1036
|||.|||||||||||||||||.|||||.|||||.|||||.|||||.||||||||||||||||||||||||||.|
Sbjct 357 AATCGAGCCTGAAACAGAAGGGATACTGACAGAATATGGTGTGGACTTCTCTGATTTCTCTTCAGAAGTTCTTG 430
Query 1037 AATGTCTTCCTCAAGGCCTGCCATGGACAATTCCACCAGAGGAGTTCAGCAAGAGAAGGGATTTAAGAAAAGAC 1110
|||||||.||||||.|||||||.||||||||.|||||.||.|||.|..||||||||||.||..||||.||||||
Sbjct 431 AATGTCTCCCTCAAAGCCTGCCCTGGACAATCCCACCTGATGAGGTGGGCAAGAGAAGAGACCTAAGGAAAGAC 504
Query 1111 TGTATCTTCACCATTGACCCATCAACCGCCCGAGACCTCGATGATGCCCTCTCCTGCAAGCCACTCGCTGACGG 1184
|||||||||||||||||.||||||||.||.||.|||||.||||||||||||.||||||.||..|||.||||.||
Sbjct 505 TGTATCTTCACCATTGATCCATCAACTGCTCGCGACCTTGATGATGCCCTCGCCTGCAGGCGGCTCACTGATGG 578
Query 1185 CAACTTCAAAGTGGGAGTTCACATTGCTGACGTGAGTTACTTTGTTCCGGAGGGATCTGATCTGGATAAAGTGG 1258
||.||||.|||||||.||.|||||.||.||.|||||||||||||||||.||||||||...|.||||||||||.|
Sbjct 579 CACCTTCGAAGTGGGCGTCCACATCGCCGATGTGAGTTACTTTGTTCCTGAGGGATCCTCTTTGGATAAAGTAG 652
Query 1259 CTGCCGAGAGGGCTACAAGCGTCTACTTGGTTCAAAAGGTGGTCCCCATGCTTCCCAGGCTGCTGTGTGAGGAG 1332
||||.|||||.||.|||||.||||||||||| ||||
Sbjct 653 CTGCTGAGAGAGCCACAAGTGTCTACTTGGT-----------------------CCAG---------------- 687
Query 1333 CTGTGCAGCCTCAACCCCATGTCCGACAAGCTGACCTTCTCTGTGATCTGGACACTGACTCCAGAGGGCAAGAT 1406
|||||
Sbjct 688 ---------------------------------------------------------------------AAGAT 692
Query 1407 CCTTGATGAATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAGCATGA 1480
||||||.||.|||||||||||.||.||||||||.||.|||||||||||.||||||||.|||||.||||||||||
Sbjct 693 CCTTGAAGAGTGGTTTGGCCGCACTATCATCCGTTCTTGCACCAAACTGAGCTACGACCATGCCCAGAGCATGA 766
Query 1481 TTGAAAGCCCAACTGAGAAAATCCCTGCGAAAGAGCTGCCCCCCATTTCCCCAGAGCATAGCAGCGAGGAGGTA 1554
|.||||..|||||||||||.|||||||.|.|||||||.|||||.|||||.||||||||.|||..|||||||||.
Sbjct 767 TCGAAAATCCAACTGAGAAGATCCCTGAGGAAGAGCTTCCCCCAATTTCTCCAGAGCACAGCGTCGAGGAGGTG 840
Query 1555 CACCAGGCCGTCTTGAATCTCCACGGAATTGCCAAGCAGTTACGCCAGCAGCGCTTTGTGGACGGCGCACTTCG 1628
||||||||.|||.||||.||.|||.|.|||||.|||||..|.||||..|||||||||||.||.||||||||.||
Sbjct 841 CACCAGGCAGTCCTGAACCTGCACAGCATTGCAAAGCAACTCCGCCGCCAGCGCTTTGTAGATGGCGCACTCCG 914
Query 1629 TTTGGATCAGCTAAAGCTTGCTTTCACTCTGGACCACGAGACCGGATTGCCTCAAGGATGTCATATCTATGAGT 1702
|||.||||||||.|||||||||||.|||||||||||.|||||.|||.||||||||||||||||.||||||||||
Sbjct 915 TTTAGATCAGCTGAAGCTTGCTTTTACTCTGGACCATGAGACTGGACTGCCTCAAGGATGTCACATCTATGAGT 988
Query 1703 ACCGCGAGAGCAACAA---------------------------------------------------------- 1718
||||.||.||||||||
Sbjct 989 ACCGAGACAGCAACAAGCTTGTAGAGGAGTTCATGCTCCTGGCCAACATGGCGGTGGCCCACAAGATCTTCCGC 1062
Query 1719 ---------------GCCCTGCTGCGCCGGCACCCCCCGCCCCAAACAAGGATGCTCAGTGACCTGGTGGAATT 1777
|||||||||||||||||.|||||.||.||.||.|.|||||||||||||||||||||.||
Sbjct 1063 ACCTTCCCTGAGCAGGCCCTGCTGCGCCGGCATCCCCCACCACAGACGAAGATGCTCAGTGACCTGGTGGAGTT 1136
Query 1778 CTGCGACCAGATGGGGCTGCCCGTGGACTTCAGCTCCGCAGGAGCCCTCAATAAAAGCC--------------- 1836
|||.||||||||||||||||||.||||..|||||||.|||||.|||||.||||||||||
Sbjct 1137 CTGTGACCAGATGGGGCTGCCCATGGATGTCAGCTCTGCAGGGGCCCTAAATAAAAGCCTGACTAAGACATTTG 1210
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1211 GAGATGACAAGTACTCTCTGGCCCGGAAGGAGGTGCTCACCAACATGTACTCCCGGCCCATGCAGATGGCACTG 1284
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1285 TACTTCTGCTCTGGGATGCTGCAGGACCAGGAGCAGTTCCGGCATTATGCTCTCAACGTTCCCCTCTACACACA 1358
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1359 CTTCACCTCTCCCATCCGCCGCTTTGCTGACGTCATAGTGCACCGCCTCCTGGCTGCTGCTCTGGGCTACAGTG 1432
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1433 AACAGCCAGATGTGGAGCCTGATACCCTACAGAAGCAAGCTGACCACTGCAATGACCGTCGCATGGCTTCCAAA 1506
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1507 CGTGTGCAGGAGCTCAGCATCGGCCTCTTCTTCGCAGTTCTAGTAAAGGAGAGTGGCCCCCTGGAGTCCGAAGC 1580
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1581 CATGGTGATGGGTGTCCTGAACCAAGCTTTCGACGTGCTGGTGCTGCGCTTTGGGGTGCAGAAGCGCATCTACT 1654
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1655 GCAATGCACTGGCCCTGCGATCCTACAGCTTCCAGAAGGTGGGGAAGAAGCCAGAGCTCACTCTTGTTTGGGAG 1728
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1729 CCTGATGACCTTGAAGAGGAGCCAACACAGCAGGTCATCACCATCTTCAGCCTGGTGGATGTGGTCCTGCAGGC 1802
Query 1837 -------------------------------------------------------------------------- 1836
Sbjct 1803 AGAGGCCACAGCCCTCAAGTACAGTGCTATCCTGAAGCGACCAGGCCTGGAGAAGGCGTCTGATGAGGAGCCTG 1876
Query 1837 ----- 1836
Sbjct 1877 AGGAC 1881
