Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13218
• Subject: NM_144665.4
• Aligned Length: 1482
• Identities: 951
• Gaps: 525

Alignment

Query    1  ATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGCG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAACCGGGGCGGCGGCAGCCCGTCGGCCGCCGCCAACTACCTGCTCTGTACCAACTGCCGGAAAGTGCTGCG  74

Query   75  GAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAAGGATAAAAGAATCAGAGTGTCTCAACCCTTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTG  148

Query  149  TCCAAGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGTCTGGACAAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCCAAGCAAACACAGTGGATGAACGTACTAACTTTCTTGTGGAAGAATACTCTACATCCGGTCGTCTGGACAAC  222

Query  223  ATCACACAGGTCATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCACACAGGTCATGAGTTTACACACTCAGTACCTGGAGTCTTTCTTGCGGAGCCAGTTTTACATGTTGCGCAT  296

Query  297  GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAATGGCTGCAGCTAGACATCAGTGTTCTTACT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGATGGTCCCCTTCCTCTACCATACAGGCACTATATTGCAATAATGGCTGCAGCTAGACATCAGTGTTCTTACT  370

Query  371  TAATAAACATGCATGTGGATGAATTTTTAAAGACTGGAGGTATTGCTGAGTGGTTGAATGGTTTGGAATATGTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TAATAAACATGCATGTGGATGAATTTTTAAAGACTGGAGGTATTGCTGAGTGGTTGAATGGTTTGGAATATGTG  444

Query  445  CCACAAAGACTGAAAAATCTTAATGAAATTAATAAGCTGCTAGCACATCGACCTTGGCTGATCACAAAAGAGCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCACAAAGACTGAAAAATCTTAATGAAATTAATAAGCTGCTAGCACATCGACCTTGGCTGATCACAAAAGAGCA  518

Query  519  CATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CATTCAGAAACTTGTCAAAACTGGAGAAAATAATTGGTCTCTGCCTGAACTGGTACATGCTGTGGTCCTCCTGG  592

Query  593  CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CACATTATCATGCTTTGGCAAGCTTTGTTTTTGGTAGTGGTATCAATCCAGAGAGAGATCCAGAAATCTCCAAT  666

Query  667  GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGATTCAGGCTAATATCAGTCAACAATTTCTGCGTTTGTGATCTTGCTAATGACAACAACATAGAGAATGCATC  740

Query  741  TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTTTCAGGCAGCAACTTTGGGATTGTGGATTCTCTAAGTGAGCTAGAGGCCTTAATGGAAAGGATGAAAAGAC  814

Query  815  TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCAAGAAGAAAGGGAAGATGAAGAGGCGTCTCAAGAAGAAATGAGCACTCGTTTTGAAAAGGAGAAGAAAGAA  888

Query  889  AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAGGTGCTTTTTTG--------------  948
            |||||||||||||||||||||||||||||||||||||||||||||||||     .|||||              
Sbjct  889  AGTCTTTTTGTGGTCTCTGGAGATACTTTTCATTCATTTCCTCATTCAG-----ATTTTGAGGATGACATGATT  957

Query  949  ----CACTTTTTTGCCTTT-------------------------------------------------------  963
                || |.|..||.||.|                                                       
Sbjct  958  ATAACA-TCTGATGTCTCTCGATATATTGAAGACCCTGGTTTTGGGTATGAAGACTTTGCCAGACGAGGAGAAG  1030

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1031  AGCATTTGCCAACATTCCGAGCTCAGGACTATACCTGGGAAAATCATGGGTTCTCCCTGGTGAACAGACTTTAT  1104

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1105  TCTGACATTGGACATCTTCTTGATGAAAAGTTTCGGATGGTCTACAATCTCACATATAACACTATGGCCACCCA  1178

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1179  TGAGGATGTTGACACAACCATGCTGCGCAGAGCTTTATTTAACTATGTTCACTGTATGTTTGGAATCAGGTATG  1252

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1253  ATGACTATGATTATGGAGAAGTTAATCAATTACTTGAAAGAAGCCTGAAGGTTTACATTAAGACAGTGACCTGC  1326

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1327  TATCCTGAGAGAACTACAAAACGCATGTATGATAGTTACTGGCGGCAGTTCAAACACTCAGAAAAAGTTCATGT  1400

Query  964  --------------------------------------------------------------------------  963
                                                                                      
Sbjct 1401  CAATCTACTTTTAATGGAAGCACGAATGCAAGCTGAACTTCTTTATGCTCTTCGTGCCATAACTCGGCATTTGA  1474

Query  964  --  963
              
Sbjct 1475  CC  1476