Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13309
- Subject:
- XM_006541555.2
- Aligned Length:
- 1678
- Identities:
- 1047
- Gaps:
- 455
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACATGGTATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCACGAACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTGGCCAGACATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACACCCTGGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTGGTTTTTGATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTA 222
Query 1 ------------------------------------------------ATGCAGGTTGAAGAAGCCACCGGTCA 26
||||||||||||||...||.||||..
Sbjct 223 CTGGTGAACGAGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTC 296
Query 27 GGCTGCGGGCCGTCGTCGGGGAAACGTGGTGCGAAGGGTGTTTGGCCGCATCCGGCGCTTTTTCAGTCGCAGGC 100
..|||...|.||||||||||||||||||||||.|||..||.||||.|||||..||||||||||||||||||||.
Sbjct 297 TACTGGTCGTCGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGCAGGA 370
Query 101 GGAATGAGCCCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCAGTGTCTGTGGATAGTCTGGCT 174
||||||||||||||.||||..|.|||||||||||||||||.||||||||||||||.||||..|||||....|.|
Sbjct 371 GGAATGAGCCCACCCTGCCTAGAGAGTTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGAT 444
Query 175 GAGCTGGAAGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACT 248
||.|||||..|||||||||||||||||||||.|||||||||.||..|..||||.|..||.|||||.||.||.||
Sbjct 445 GAACTGGAGAACGGAGCCCTGCTGCTGCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAGCGGCT 518
Query 249 TCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCC 322
||||||||||||.|||||||||||.|||||.||.|||||..||||||||||.|||.||||||||.||||.|||.
Sbjct 519 TCTGGGATCCAAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCA 592
Query 323 AATTCATTGAAAAACATGGCTTAAGCGCAGTGGGGATTTTTACCCTTGAATACTCCGTGCAGCGAGTGCGTCAG 396
||||||||||.|||||||||||||||.|||||||||||||.|||.||||||||||..|||.|.|.||||.|.||
Sbjct 593 AATTCATTGAGAAACATGGCTTAAGCTCAGTGGGGATTTTCACCATTGAATACTCTCTGCGGAGGGTGCTTGAG 666
Query 397 CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCACT 470
||||||||...||||||..||||.||||||.|.||.||||||||||.|..||||||.|||||||||||||..||
Sbjct 667 CTCCGTGAGTTATTTGACAAAGGCCTGGATATTGTACTGGATGACAGTGTGAATGTCCATGATGTGGCTGAGCT 740
Query 471 CCTCAAGGAGTTTTTCCGTGACATGAAGGATTCTCTGCTGCCAGATGATCTGTACATGTCATTCCTCCTGACAG 544
|||||||||||||||.|||||.||||||||..||||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 741 CCTCAAGGAGTTTTTTCGTGAGATGAAGGACCCTCTGCTGCCTGATGATCTGTACATGTCCTTCCTCCTGACTG 814
Query 545 CAACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT 618
|||||.|.||||||.||||||||.||||||||||||||.|.|||||.||.|||||||||||.||||||||||||
Sbjct 815 CAACTCTGAAGCCCAAGGATCAGGTTTCTGCCCTGCAGCTTCTGGTTTATCTGATGCCACCTTGCCACAGTGAT 888
Query 619 ACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACA 692
||.||.||.||||||||||||||.|||||||||||||||||||||||.||.|||||.||||||.||||||||||
Sbjct 889 ACTCTCGAACGTCTGCTGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGACA 962
Query 693 GTTGGTCCCAGGCAACCGTATGACTTCCACTAACTTGGCCTTGGTGTTTGGATCTGCTCTCCTGAAAAAAGGAA 766
|.||||.|||||.|||||.|||||||||||.||||||||.||||||||||||.|||||||||||||.||.||.|
Sbjct 963 GCTGGTTCCAGGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGA 1036
Query 767 AGTTTGGCAAGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGT 840
||||.|.|||.|..||.||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||||||
Sbjct 1037 AGTTGGCCAACAAGGAATCCAGGAAGACTAAACTGGGGATTGATCACTATGTTGCATCTGTCAATGTTGTCCGT 1110
Query 841 GCCATGATTGATAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAAGCGCGTGTG 914
||||||||||||||||||||..||||||||||||||||.|||||||||||||.|.|||||||||||||.|||||
Sbjct 1111 GCCATGATTGATAACTGGGACATCCTCTTCCAGGTGCCCCCCCATATTCAGAAGGAGGTTGCTAAGCGTGTGTG 1184
Query 915 GAAGTCCAGCCCGGAAGCACTTGATTTTATCAGACGCAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAAGA 988
||||||||||||.|||||.||.|||||||||||||||.||||..|||||||||||||||||||.||||||||||
Sbjct 1185 GAAGTCCAGCCCTGAAGCCCTGGATTTTATCAGACGCCGGAATCTGAGGAAGATCCAGAGTGCTCGCATAAAGA 1258
Query 989 TGGAAGAGGATGCACTACTTTCTGATCCAGTGGAAACCTCTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGC 1062
|||||||||||||..|||||||||||||||||||||.||||||||||||||.|||||||.||||||||||.|||
Sbjct 1259 TGGAAGAGGATGCTTTACTTTCTGATCCAGTGGAAAACTCTGCTGAAGCCCAGGCTGCTATCCTTGCTCAGAGC 1332
Query 1063 AAGCCTTCTGATGA------------------------------------------------------------ 1076
.||||.|.||||||
Sbjct 1333 CAGCCCTTTGATGAAGACCCCGAAGGAGCCCCAGATGTGCACGAGGTCTTGAATGATAACCTGAACTATGACTT 1406
Query 1077 -------------------------------------------------------------------------- 1076
Sbjct 1407 TGAAGACGAATCGGATTTTGAAGACCAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAA 1480
Query 1077 -------------------------------------AGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACT 1113
||||.|||||||||||||.|||||||||.||.|||||
Sbjct 1481 ACAACGAAGATACCGACTCAGACGCTGATGTAATCCCAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACT 1554
Query 1114 GCCCGTTCCCATGACGATGAGGAAGG---AGCGGGTAACCCTCCCATTCCGGA-GCAAGACCGCCCATTGCTCC 1183
||..||||||.||||.|.|||||||| |||.||||||||.|||| | || ||||||||||.|||.||
Sbjct 1555 GCTGGTTCCCCTGACAAAGAGGAAGGAGCAGCCGGTAACCCCCCCA------ACGC-AGACCGCCCACTGCCCC 1621
Query 1184 GTGTGCCCCGGGAGAAGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCT 1233
|||||||||.||.||||.|||.||||..| |.||.|..||||||||||
Sbjct 1622 GTGTGCCCCAGGGGAAGAAGGGCAAATTT---GCCACCCGCTTCTTTCCT 1668
