Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13309
- Subject:
- XM_011251020.1
- Aligned Length:
- 1732
- Identities:
- 1047
- Gaps:
- 509
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGTTGGTGAGCGTCCTGGGAGGAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGGTATCCATTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTCCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACACCCTGGAGAAGTGGTTTTTGATGCTGAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGAACGAGCTTACCCG 296
Query 1 ----------------------------ATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCGTCGGG 46
||||||||||||||...||.||||....|||...|.||||||||||
Sbjct 297 TCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTCTACTGGTCGTCGTCGTCGGG 370
Query 47 GAAACGTGGTGCGAAGGGTGTTTGGCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATGAGCCCACCTTGCCC 120
||||||||||||.|||..||.||||.|||||..||||||||||||||||||||.||||||||||||||.||||.
Sbjct 371 GAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGCAGGAGGAATGAGCCCACCCTGCCT 444
Query 121 CGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCAGTGTCTGTGGATAGTCTGGCTGAGCTGGAAGACGGAGCCCT 194
.|.|||||||||||||||||.||||||||||||||.||||..|||||....|.|||.|||||..||||||||||
Sbjct 445 AGAGAGTTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAACTGGAGAACGGAGCCCT 518
Query 195 GCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGA 268
|||||||||||.|||||||||.||..|..||||.|..||.|||||.||.||.||||||||||||||.|||||||
Sbjct 519 GCTGCTGCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAGCGGCTTCTGGGATCCAAGAGGAAGA 592
Query 269 TGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACATGGC 342
||||.|||||.||.|||||..||||||||||.|||.||||||||.||||.|||.||||||||||.|||||||||
Sbjct 593 TGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTCATTGAGAAACATGGC 666
Query 343 TTAAGCGCAGTGGGGATTTTTACCCTTGAATACTCCGTGCAGCGAGTGCGTCAGCTCCGTGAAGAATTTGATCA 416
||||||.|||||||||||||.|||.||||||||||..|||.|.|.||||.|.||||||||||...||||||..|
Sbjct 667 TTAAGCTCAGTGGGGATTTTCACCATTGAATACTCTCTGCGGAGGGTGCTTGAGCTCCGTGAGTTATTTGACAA 740
Query 417 AGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTG 490
|||.||||||.|.||.||||||||||.|..||||||.|||||||||||||..|||||||||||||||||.||||
Sbjct 741 AGGCCTGGATATTGTACTGGATGACAGTGTGAATGTCCATGATGTGGCTGAGCTCCTCAAGGAGTTTTTTCGTG 814
Query 491 ACATGAAGGATTCTCTGCTGCCAGATGATCTGTACATGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGGAT 564
|.||||||||..||||||||||.|||||||||||||||||.|||||||||||.||||||.|.||||||.|||||
Sbjct 815 AGATGAAGGACCCTCTGCTGCCTGATGATCTGTACATGTCCTTCCTCCTGACTGCAACTCTGAAGCCCAAGGAT 888
Query 565 CAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTGCCACAGTGATACCCTGGAGCGTCTGCTGAA 638
|||.||||||||||||||.|.|||||.||.|||||||||||.||||||||||||||.||.||.|||||||||||
Sbjct 889 CAGGTTTCTGCCCTGCAGCTTCTGGTTTATCTGATGCCACCTTGCCACAGTGATACTCTCGAACGTCTGCTGAA 962
Query 639 GGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACAGTTGGTCCCAGGCAACCGTA 712
|||.|||||||||||||||||||||||.||.|||||.||||||.|||||||||||.||||.|||||.|||||.|
Sbjct 963 GGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGACAGCTGGTTCCAGGTAACCGAA 1036
Query 713 TGACTTCCACTAACTTGGCCTTGGTGTTTGGATCTGCTCTCCTGAAAAAAGGAAAGTTTGGCAAGAGAGAGTCC 786
||||||||||.||||||||.||||||||||||.|||||||||||||.||.||.|||||.|.|||.|..||.|||
Sbjct 1037 TGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGAAGTTGGCCAACAAGGAATCC 1110
Query 787 AGGAAAACAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTGATAACTGGGA 860
|||||.||.||.|||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 1111 AGGAAGACTAAACTGGGGATTGATCACTATGTTGCATCTGTCAATGTTGTCCGTGCCATGATTGATAACTGGGA 1184
Query 861 TGTCCTCTTCCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAAGCGCGTGTGGAAGTCCAGCCCGGAAGCAC 934
..||||||||||||||||.|||||||||||||.|.|||||||||||||.|||||||||||||||||.|||||.|
Sbjct 1185 CATCCTCTTCCAGGTGCCCCCCCATATTCAGAAGGAGGTTGCTAAGCGTGTGTGGAAGTCCAGCCCTGAAGCCC 1258
Query 935 TTGATTTTATCAGACGCAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGGATGCACTACTT 1008
|.|||||||||||||||.||||..|||||||||||||||||||.|||||||||||||||||||||||..|||||
Sbjct 1259 TGGATTTTATCAGACGCCGGAATCTGAGGAAGATCCAGAGTGCTCGCATAAAGATGGAAGAGGATGCTTTACTT 1332
Query 1009 TCTGATCCAGTGGAAACCTCTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGA------ 1076
||||||||||||||||.||||||||||||||.|||||||.||||||||||.|||.||||.|.||||||
Sbjct 1333 TCTGATCCAGTGGAAAACTCTGCTGAAGCCCAGGCTGCTATCCTTGCTCAGAGCCAGCCCTTTGATGAAGACCC 1406
Query 1077 -------------------------------------------------------------------------- 1076
Sbjct 1407 CGAAGGAGCCCCAGATGTGCACGAGGTCTTGAATGATAACCTGAACTATGACTTTGAAGACGAATCGGATTTTG 1480
Query 1077 -------------------------------------------------------------------------- 1076
Sbjct 1481 AAGACCAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAAGATACCGACTCA 1554
Query 1077 -----------------AGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATGACGATGA 1133
||||.|||||||||||||.|||||||||.||.|||||||..||||||.||||.|.||
Sbjct 1555 GACGCTGATGTAATCCCAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCCCTGACAAAGA 1628
Query 1134 GGAAGG---AGCGGGTAACCCTCCCATTCCGGA-GCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAG 1203
|||||| |||.||||||||.|||| | || ||||||||||.|||.|||||||||||.||.||||.||
Sbjct 1629 GGAAGGAGCAGCCGGTAACCCCCCCA------ACGC-AGACCGCCCACTGCCCCGTGTGCCCCAGGGGAAGAAG 1695
Query 1204 GCCAAAACTGGCGTCAGCTACTTCTTTCCT 1233
|.||||..| |.||.|..||||||||||
Sbjct 1696 GGCAAATTT---GCCACCCGCTTCTTTCCT 1722
