Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13309
- Subject:
- XM_017318632.1
- Aligned Length:
- 1816
- Identities:
- 1047
- Gaps:
- 593
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGTGGCTGCATTCCTTTTCTAAAGGCAATAAGGACACGATGTCCCATAATCATCCCCTTTTTGCTGTTGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCTGCCTTCATTTTTTTAGTGAGCGTCCTGGGAGGAGCCCCAGGACAGAACTCAGACCGCAGCATGGACATGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATCCATTCACAGCCTCTCTGAGCTGGAGCGCCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATTTCCTCTCTGAATTCAAGCCGGACAGAGCTCTACCCACTGACCGTCCAAACACCCTGGAGAAGTGGTTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGCTGAGAGGACAAGACAGGGCTGCATCACTCAAGACCTTTGGCATCCGCCTGGAAGAGGTACTGGTGAACG 370
Query 1 --------------------------------------ATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGGGC 36
||||||||||||||...||.||||....|||...|.
Sbjct 371 AGCTTACCCGTCGCAAGCAGCGTGAACTGACACCCACGATGCAGGTTGAAGATATCAACGGTTCTACTGGTCGT 444
Query 37 CGTCGTCGGGGAAACGTGGTGCGAAGGGTGTTTGGCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATGAGCC 110
||||||||||||||||||||||.|||..||.||||.|||||..||||||||||||||||||||.||||||||||
Sbjct 445 CGTCGTCGGGGAAACGTGGTGCAAAGAATGCTTGGACGCATGAGGCGCTTTTTCAGTCGCAGGAGGAATGAGCC 518
Query 111 CACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCAGTGTCTGTGGATAGTCTGGCTGAGCTGGAAG 184
||||.||||..|.|||||||||||||||||.||||||||||||||.||||..|||||....|.|||.|||||..
Sbjct 519 CACCCTGCCTAGAGAGTTCACTCGCCGTGGACGTCGAGGTGCAGTTTCTGCAGATAGCGCAGATGAACTGGAGA 592
Query 185 ACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC 258
|||||||||||||||||||||.|||||||||.||..|..||||.|..||.|||||.||.||.||||||||||||
Sbjct 593 ACGGAGCCCTGCTGCTGCAGATCCTGCAGCTCTCCCAGCTTTCATCGCCTATTGGACAGCGGCTTCTGGGATCC 666
Query 259 AAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCCAATTCATTGA 332
||.|||||||||||.|||||.||.|||||..||||||||||.|||.||||||||.||||.|||.||||||||||
Sbjct 667 AAGAGGAAGATGAGCCTCAACCCAATTGCTCAACAAATCCCTCAGATTGTTGAGACTTGTTGCAAATTCATTGA 740
Query 333 AAAACATGGCTTAAGCGCAGTGGGGATTTTTACCCTTGAATACTCCGTGCAGCGAGTGCGTCAGCTCCGTGAAG 406
.|||||||||||||||.|||||||||||||.|||.||||||||||..|||.|.|.||||.|.||||||||||..
Sbjct 741 GAAACATGGCTTAAGCTCAGTGGGGATTTTCACCATTGAATACTCTCTGCGGAGGGTGCTTGAGCTCCGTGAGT 814
Query 407 AATTTGATCAAGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAG 480
.||||||..||||.||||||.|.||.||||||||||.|..||||||.|||||||||||||..||||||||||||
Sbjct 815 TATTTGACAAAGGCCTGGATATTGTACTGGATGACAGTGTGAATGTCCATGATGTGGCTGAGCTCCTCAAGGAG 888
Query 481 TTTTTCCGTGACATGAAGGATTCTCTGCTGCCAGATGATCTGTACATGTCATTCCTCCTGACAGCAACTTTAAA 554
|||||.|||||.||||||||..||||||||||.|||||||||||||||||.|||||||||||.||||||.|.||
Sbjct 889 TTTTTTCGTGAGATGAAGGACCCTCTGCTGCCTGATGATCTGTACATGTCCTTCCTCCTGACTGCAACTCTGAA 962
Query 555 GCCCCAGGATCAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTGCCACAGTGATACCCTGGAGC 628
||||.||||||||.||||||||||||||.|.|||||.||.|||||||||||.||||||||||||||.||.||.|
Sbjct 963 GCCCAAGGATCAGGTTTCTGCCCTGCAGCTTCTGGTTTATCTGATGCCACCTTGCCACAGTGATACTCTCGAAC 1036
Query 629 GTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACAGTTGGTCCCA 702
|||||||||||||.|||||||||||||||||||||||.||.|||||.||||||.|||||||||||.||||.|||
Sbjct 1037 GTCTGCTGAAGGCTCTGCATAAAATCACTGAGAACTGTGAAGACTCCATTGGCGTTGATGGACAGCTGGTTCCA 1110
Query 703 GGCAACCGTATGACTTCCACTAACTTGGCCTTGGTGTTTGGATCTGCTCTCCTGAAAAAAGGAAAGTTTGGCAA 776
||.|||||.|||||||||||.||||||||.||||||||||||.|||||||||||||.||.||.|||||.|.|||
Sbjct 1111 GGTAACCGAATGACTTCCACCAACTTGGCTTTGGTGTTTGGAACTGCTCTCCTGAAGAAGGGGAAGTTGGCCAA 1184
Query 777 GAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTG 850
.|..||.||||||||.||.||.|||||||||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct 1185 CAAGGAATCCAGGAAGACTAAACTGGGGATTGATCACTATGTTGCATCTGTCAATGTTGTCCGTGCCATGATTG 1258
Query 851 ATAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAAGCGCGTGTGGAAGTCCAGC 924
||||||||||..||||||||||||||||.|||||||||||||.|.|||||||||||||.|||||||||||||||
Sbjct 1259 ATAACTGGGACATCCTCTTCCAGGTGCCCCCCCATATTCAGAAGGAGGTTGCTAAGCGTGTGTGGAAGTCCAGC 1332
Query 925 CCGGAAGCACTTGATTTTATCAGACGCAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGGA 998
||.|||||.||.|||||||||||||||.||||..|||||||||||||||||||.||||||||||||||||||||
Sbjct 1333 CCTGAAGCCCTGGATTTTATCAGACGCCGGAATCTGAGGAAGATCCAGAGTGCTCGCATAAAGATGGAAGAGGA 1406
Query 999 TGCACTACTTTCTGATCCAGTGGAAACCTCTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGCAAGCCTTCTG 1072
|||..|||||||||||||||||||||.||||||||||||||.|||||||.||||||||||.|||.||||.|.||
Sbjct 1407 TGCTTTACTTTCTGATCCAGTGGAAAACTCTGCTGAAGCCCAGGCTGCTATCCTTGCTCAGAGCCAGCCCTTTG 1480
Query 1073 ATGA---------------------------------------------------------------------- 1076
||||
Sbjct 1481 ATGAAGACCCCGAAGGAGCCCCAGATGTGCACGAGGTCTTGAATGATAACCTGAACTATGACTTTGAAGACGAA 1554
Query 1077 -------------------------------------------------------------------------- 1076
Sbjct 1555 TCGGATTTTGAAGACCAGGACCATCTGGATCTTGCAGAGGTTCCCTATCTTGATGTAATTCCAAACAACGAAGA 1628
Query 1077 ---------------------------AGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCC 1123
||||.|||||||||||||.|||||||||.||.|||||||..||||||
Sbjct 1629 TACCGACTCAGACGCTGATGTAATCCCAGGTCCCTCTGAGGAGCCTGCTGTGCCTGCCAGCACTGCTGGTTCCC 1702
Query 1124 ATGACGATGAGGAAGG---AGCGGGTAACCCTCCCATTCCGGA-GCAAGACCGCCCATTGCTCCGTGTGCCCCG 1193
.||||.|.|||||||| |||.||||||||.|||| | || ||||||||||.|||.|||||||||||.
Sbjct 1703 CTGACAAAGAGGAAGGAGCAGCCGGTAACCCCCCCA------ACGC-AGACCGCCCACTGCCCCGTGTGCCCCA 1769
Query 1194 GGAGAAGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCT 1233
||.||||.|||.||||..| |.||.|..||||||||||
Sbjct 1770 GGGGAAGAAGGGCAAATTT---GCCACCCGCTTCTTTCCT 1806
