Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13319
• Subject: XM_024449326.1
• Aligned Length: 898
• Identities: 385
• Gaps: 488

Alignment

Query   1  ATGTCAGACAACAAAGAAAGGAAGAGTCAAGGATTTCCTAAAGAAGATAACCAAGACACAAGTTCATTAGCTGA  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  TGCTGTAGAGAAAGTTGCAAAGCAACAACAATCACAAGCATCAGAGATAGAAAAAAACAAAAAGGTTCTGTTCA  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  ATTTGAAGAATGAACTTCATGAGCTTGAAAAAGAAATAGCAGCTATCTCTGCAGAAACTAAAGAAACAGAAAGA  222
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 223  CAAATTTATCAACAAGATTCTGCCATAGAGAATACCAAACTTCATTGTGATAGCCTGGAAACTCAAATCAAATC  296
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 297  CTTACATTCAGAAAATGTAAAGCTTAAATTTGACATAGAAACAGCCCAAGAAGATTTTGAGGAACACATGATAA  370
                                                                              |||||||
Sbjct   1  -------------------------------------------------------------------ATGATAA  7

Query 371  AATATAATGCATATTATGCAAAAATAAAAGCACATAAAAATAGTTTGGGGGAAGTAGAGAGCAAATGGTCATTT  444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   8  AATATAATGCATATTATGCAAAAATAAAAGCACATAAAAATAGTTTGGGGGAAGTAGAGAGCAAATGGTCATTT  81

Query 445  ATGACTGAACTCCATGAAAAGCGAGATTTTGTTAAAAAATTAAAGACAATGAAAGAAGAACTTATGCAAGATCT  518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  82  ATGACTGAACTCCATGAAAAGCGAGATTTTGTTAAAAAATTAAAGACAATGAAAGAAGAACTTATGCAAGATCT  155

Query 519  TCAAAATCCAGGAGGGAACCGAATAACACAAGTACAGGAAGACATTACAAACTTAAAGGATAAAATTATAACTG  592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156  TCAAAATCCAGGAGGGAACCGAATAACACAAGTACAGGAAGACATTACAAACTTAAAGGATAAAATTATAACTG  229

Query 593  TAAAAGAATCTATCATTGAAAAAACTTGTTTTCTTGAGGAAGAAAAAAAGACACATGAAAAATTAAGAAAAGAA  666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230  TAAAAGAATCTATCATTGAAAAAACTTGTTTTCTTGAGGAAGAAAAAAAGACACATGAAAAATTAAGAAAAGAA  303

Query 667  ATAGAGGGTCTCGCCCCATCGCCCAGGCTGGAGTGCA---------GTA--GTGCAA-TCTCGGCTCACTGCAA  728
           ||||||                          ||.||         |||  .||||| |||          .||
Sbjct 304  ATAGAG--------------------------GTACAACATAAGAGGTATGATGCAATTCT----------TAA  341

Query 729  GC-TCTGC-CTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGACTACAGGCGCCTGCCA  800
           || |.||| .|..|||||..|         |..||.||||.|    .|.||     |||.||||     ||.||
Sbjct 342  GCGTTTGCATTGTCAGGTGAA---------CAAGCTTCAGTC----AAATA-----GACGACAG-----TGGCA  392

Query 801  ---CCACACCCAGCTAATT-------------------TT------TTGCATT----TTTAGTAGAGACGGGGT  842
              ..|||..||.| ||||                   ||      .||||||    |..|  ||||       
Sbjct 393  ATGGAACATTCAAC-AATTGGAAAAAACTGCAGCCGAATTAAGAAAATGCATTGGAATGCA--AGAG-------  456

Query 843  TTCACCATGT  852
                     
Sbjct 457  ----------  456