Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13437
- Subject:
- XM_005252402.5
- Aligned Length:
- 1599
- Identities:
- 1054
- Gaps:
- 543
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGTTCTCCGAGAGGAAAAGAAGCAGGAAATCCCAGAGCTTCAAACTGGTGAGCCGAGATTATCACCACGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGTATAAGATCCCAGAATTCAGCAACGATGTTAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAG 148
Query 1 -----------------------------------ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTAT 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGAAAGCATGGAAATAAAAAAGCAAATTACAGGGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTAT 222
Query 40 CAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT 296
Query 114 GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGA 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGA 370
Query 188 GTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCC 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCC 444
Query 262 AATGGTATGGTTGTCAACAAACATTCAGAAGGCTCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGG 335
||| ||||||||||||||||||||||||||||||||
Sbjct 445 AAT---------------------------------------GGAGAACTTCCAGTGGTGAATTCATCAGCTGG 479
Query 336 ATCAAACTGCTGTACTTGTAACTGCCAGTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAAT 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATCAAACTGCTGTACTTGTAACTGCCAGTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAAT 553
Query 410 TAATGCAAATTCAAGCAGTTGGAACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 TAATGCAAATTCAAGCAGTTGGAACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACT 627
Query 484 GCTGTCTCACGAAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 GCTGTCTCACGAAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAA 701
Query 558 GCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGTGGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACA 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 GCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGTGGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACA 775
Query 632 CCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 CCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAA 849
Query 706 CTTGCTGAAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 CTTGCTGAAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGG 923
Query 780 AAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGA 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 AAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGA 997
Query 854 AGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACA 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 AGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACA 1071
Query 928 GAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCA 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1072 GAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCA 1145
Query 1002 AATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCT---CAGAGATCGCGGACAGTGATGAAAGACTGGACGGCA 1072
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1146 AATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCTCAGCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCA 1219
Query 1073 TTGCTCTACCACCAACA-------GTGGTC-------------------------------------------- 1095
||||||||||||||||| |||||.
Sbjct 1220 TTGCTCTACCACCAACAGGTGCTTGTGGTGGGCCCTGCACTGTTCTGCCGGGTGGGAGTGCAGCGGTGACCCTA 1293
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1294 GTCTTGCAGAGCTCACCTCAGACAATGTCACAAGAAAAGGGACAGATGGCAGAACCCTGGGAGGAGCAGCATCT 1367
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1368 CGTGCTCCTGAACAACCTTACCAGAGACAGAGCTGAAACAGGAGCTTTGTCCCAAACCAGCCAAGACTTCAAGC 1441
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1442 ACCATTCATTCCTCATAACTCAGGTCTCAGCTACACTTCATCATCAGAGAGGGATTCGCAACTTTCCCACGCCA 1515
Query 1096 --------------------------------------------- 1095
Sbjct 1516 GGCTCAGCCAAGTCTCTTACCCTTCACATCTCTTGCCTCTCTCTC 1560