Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13437
- Subject:
- XR_002956969.1
- Aligned Length:
- 2612
- Identities:
- 865
- Gaps:
- 1745
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAGATGAAAGCATGGAAATAAAAAAGCAAATTACAG 74
Query 1 --ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 148
Query 73 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 222
Query 147 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 296
Query 221 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 370
Query 295 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 444
Query 369 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 518
Query 443 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 592
Query 517 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 666
Query 591 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 740
Query 665 GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA 738
|||||||||||||||||||||||||||||
Sbjct 741 GCATTGTTCTGGAATCACCTTCCTCAGAT--------------------------------------------- 769
Query 739 TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT 812
Sbjct 770 -------------------------------------------------------------------------- 769
Query 813 TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG 886
Sbjct 770 -------------------------------------------------------------------------- 769
Query 887 GACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG 960
|||||||||||||||||||||||||||||||||||||||||
Sbjct 770 ---------------------------------TCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG 810
Query 961 CTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG 1034
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 CTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG 884
Query 1035 CTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACAGTGGTC------------- 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||.
Sbjct 885 CTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACA--GGTAAATAAAACGCATT 956
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 957 TACATTTTCATCACCTCCTGGAAAATACAGCCCACAAAACTATTTGCATTGAAAACGATTTTAACATTAGACAT 1030
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1031 GCAGACACTTGAGCAAACTGCTTCTGCAGTGGACCAGGCCCCGTCATTGGAGCTTCTCAAGGCCCCGTACTCAG 1104
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1105 AGATGTTTTTCATACTGAATAGAAAAACGTTTTTCTCACACTCTTATTTTCATAAAAATCTCAGAAGAGCAAAT 1178
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1179 CCTAAGAACTAAGTATCATAACATTTTGCCTCCCCAAACCTTTGGACATTACAAAATATTTTTAACGTGAAATG 1252
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1253 AGATTTCACCTTAAAACGGGGACCACTAATTTTGTGTGATCAAATTCATGGCTAGGCTGTCCTCTCCCACCTCC 1326
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1327 TCCAAACGGCCTTGGAGCCTTGAGCAGTCAATCAGTGGACACCCAGTGAATACTATGTTTTAACTGAGCGATTT 1400
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1401 GAACAAGGCCAGCCATCCGGCGTGAGTGGCACATTCCTAATACCAGGACCAGATCAGCTGAAGATACCCTTCCA 1474
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1475 TGGAAGCATTTGCTGCACGCTGTTGTGTTAAGCCATAGACATAATTCCAACTTCATGTTATTTGACTCTCAAGT 1548
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1549 AATGCTTCTGACCCTGGCTTCCTACCTGTGTATGGGTTCATATCTGAGAGCCAGAGGGGCAGGTGTCTGATCAA 1622
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1623 TGAGCCTTGTGGAAAACAATGTATCCCCTCCATTGGTCACAGGACTCTACTGACTTCCCTCCAAAGGATATCTG 1696
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1697 AAGATTCTCTGCCCACAAAACCCAGTGGTCTGATGAAGGACTGCAAACCACAGCTCTTGTGTTTTTTGCACCAT 1770
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1771 GGGTTTTAAAATCCGTCCTCTGCCTCCCACAAGGAGCTACTACCCAAGGGAAGGGAGAAGATTAATTGGTGACC 1844
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1845 TTTCGCCGTGTTAAAATAGGATGAGTATGTTGCTGGTCAAGGCAGAAACGCTAACTTCCAACTGTGGTCTGTTA 1918
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1919 AGAGATCTGCTGGGAACCTTCAGAAGCACTGCCTTCCAAGGCGGGGCCACAGCTTGGGGTGTTCAGCACTTGAG 1992
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1993 GACGGGTGGAGCTTGTTCAACCCAAAGATGTGTGCGATGAACGGATCTACACACTGGAAATACGTATCAAAACT 2066
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2067 GCAACAGCAAAATCATATTTTGTAAATTAAAATTGTGTTTACTTACTGTGACTACTGTTCAGTCTTTATTCAGA 2140
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2141 AACCTTTTTATAGGCTTTCTTAGCAAAAAAAAAATCCATATCTATGGATAATGTCTCAATCTTCTGTATATATG 2214
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2215 TTTTATTAATATGTAAATATTTAGATTTTTTAAAATTACTATGTTCTTTAAAAAAGAATTCAATGCAAGCCTGG 2288
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2289 TTGTGAAAATGGTGTATAACATTGTGTTGTGGTATCAATTCCCAAGATGCTCTTTATGTCTGATCTGGAAGAAT 2362
Query 1096 ---------------------- 1095
Sbjct 2363 ACAATAAATTACTTTAATTGAA 2384
