Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13437
- Subject:
- XR_930482.2
- Aligned Length:
- 2180
- Identities:
- 867
- Gaps:
- 1311
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAGATGAAAGCATGGAAATAAAAAAGCAAATTACAG 74
Query 1 --ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 148
Query 73 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 222
Query 147 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 296
Query 221 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 370
Query 295 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 444
Query 369 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 518
Query 443 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 592
Query 517 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 666
Query 591 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 740
Query 665 GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA 738
|||||||||||||||||||||||||||||
Sbjct 741 GCATTGTTCTGGAATCACCTTCCTCAGAT--------------------------------------------- 769
Query 739 TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT 812
Sbjct 770 -------------------------------------------------------------------------- 769
Query 813 TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG 886
Sbjct 770 -------------------------------------------------------------------------- 769
Query 887 GACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG 960
|||||||||||||||||||||||||||||||||||||||||
Sbjct 770 ---------------------------------TCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG 810
Query 961 CTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG 1034
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 CTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG 884
Query 1035 CTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACA-------GTGGTC------ 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||.
Sbjct 885 CTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACAGGTGCTTGTGGTGGGCCCT 958
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 959 GCACTGTTCTGCCGGGTGGGAGTGCAGCGGTGACCCTAGTCTTGCAGAGCTCACCTCAGACAATGTCACAAGAA 1032
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1033 AAGGGACAGATGGCAGAACCCTGGGAGGAGCAGCATCTCGTGCTCCTGAACAACCTTACCAGAGACAGAGCTGA 1106
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1107 AACAGGAGCTTTGTCCCAAACCAGCCAAGACTTCAAGCACCATTCATTCCTCATAACTCAGGTCTCAGCTACAC 1180
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1181 TTCATCATCAGAGAGGGATTCGCAACTTTCCCACGCCAGGCTCAGCCAAGTCTCTTACCCTTCACATCTCTTGC 1254
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1255 CTCTCTCTCTGAAATTATCTTGCTTATTTATGTGTGTGTGTATCACCCATCTTTCCACTGGAATCTGAGCCTTG 1328
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1329 TGATGTCAGGCTGTTAAGATTTCAGGCCCTGGTGAAAACATGTTCAGGATGCCCTCTCTCCCCTTTGCCCAGCA 1402
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1403 AGAGTGGACTGATTAAAGTTGGACCTGAGGTTTCCATGAATATGCAACCGAGTCATTCTGACGACAGTGAGTCC 1476
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1477 TGGCCTCCCAGTGCTGCCAGTTACCAGAAGTGACTCCCCTTCTCCCATCAGCCCAAACCCAGAGCCTTTATCAC 1550
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1551 AGAACCCAAGATTGAGAGGAGGGTCAGGCTGGTTGGACAGTGGCCTTATCATGGGATGGATGGATCAGGAGCCT 1624
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1625 TTTACAGCGCTCTCCTTTCCGCTGTATCCCATTGTCTTAGATCACGTGGACTTGCCTTTTCCCCTAATACCGCC 1698
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1699 CCCTCAGTGCTCTTCTATAATTGGAGAAATTGTGTCAATAGATCGACCAAAGAGATGCAGGTTGTACTCCATGA 1772
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1773 GAATTTAATAAACGCTAGCGATTCAAAGCAACTTGAATTTACACAGATCAACTCCTATTATGTTTTGTAACCTC 1846
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1847 AAATGCGTGAAATTGATTATCCCCCCGAAAGTAATATATACAGATATGTGTGTATATAAATATTTATTTCTATT 1920
Query 1096 ---------------------------------- 1095
Sbjct 1921 TTGTTATTGGTGAAATTAAAAAGAATGTTTAAAT 1954
