Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13479
- Subject:
- XM_011527885.3
- Aligned Length:
- 2592
- Identities:
- 1195
- Gaps:
- 1395
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGATGTTGATGCTGGTGGCGGCTGTGACCATGTGGCTCCGACCGCTGGTCACAGCTCAGCTCTGTCGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGCACAGTGAGGACAGGAAAAGTGTTTAATCTGATACAGGACGTTCAAGGGGACCGCCTGTATTTTCATCCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAACAACACGCTTGATTAAACATCCTTGCGAGAAAAATATAGCACTATATCTAGGGAAACAAGTTTTTTTCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGGATAACTTTGAGACTAGTCTCCTTCCATTTACCATCCCTACATCAATGCAGGTCGGCGTACCAGAAGTGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCAGCACATTTTGCTGGTTCGTTATTGCTGTTAGTAGTGGATCAAAAAGTCTATATTTATGATTATGAAAATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTCTTGGAGCATGTCTTTAGGTATAAAACACCCTGTTACACATGTCTCTGGTGATAATTGTTGTTATACTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTTTGTTTTGTGTGCATGTCAGTAATTTGGTTTTTGCATATTTCCGTGGAGATCAGATATCCCAGACTTATAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATATTATTCAAATACTGGGGGATTCAGTTTTTGGAAGTATCACTATGACAGACAGGCAGAAATCATTGGGTCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGGCGGAATCTTCCACTTTTTTTCTTTGTCACAGGTTGCGATGCTTGTAGTGAATCAAGGGAAGGGCATGTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTACTCAGATCACCCCCTCAACCGGAGTTTCGGGCTGTCTTTTGACTATAATGGGACTCTAGACATCCTCAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCCCCCGGCCAGAGAGGCATCCTGCTCCTATGGTTTGAGAACAGCCTGTTGTTTTCCCATAATGCAGGTCAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCGTCGACACCGTCCGGGTGAAAAAAGGAGACCAGACCTTGTTTTCTTCCATTTTTGAAGCCAAGATCACCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACAACATTGCTGTCACTGAAAATGAACTGGCAGTTATAACTCGGGAGGATAATTTGTATTATGGCAATCTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATCGTGCCAAGTTCCATAATCAAATTTGCAGACCAATACATCTGGTCAGAAGACGTGGCCCTGATGTTCAGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCAGGGACTCTGGAAATACTGACCCCACTGCGTGACACAGCCTTTCCAGCTTTTGATTTCCAGAAGTGCCTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGAATATCCAGGCGCTTCTCATGGACCCTGAACTCCACGTTGGAAAGTGCAAGATAGAGTTTCTGACAGGAGA 1184
Query 1 -------------ATGTATACCATTGACATGCACAGCCAGCTGGAATTGACTGCTTCGTTGATACCCCAGCCAG 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATTTATATACAGGATGTATACCATTGACATGCACAGCCAGCTGGAATTGACTGCTTCGTTGATACCCCAGCCAG 1258
Query 62 GCACATCCCTGATTCCTCTGGTGATGGTGAGCAACCCCCACTCCCTGGGGTTCCAGGCCACCTTCTACGAGAAC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCACATCCCTGATTCCTCTGGTGATGGTGAGCAACCCCCACTCCCTGGGGTTCCAGGCCACCTTCTACGAGAAC 1332
Query 136 GGTTACACATCAGATGGGAACACCAAGTACAAACTGGATATTTTCCTAAAACAGCAGCAGCACTGGGGCAGGAC 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGTTACACATCAGATGGGAACACCAAGTACAAACTGGATATTTTCCTAAAACAGCAGCAGCACTGGGGCAGGAC 1406
Query 210 CGACTCCAACTTCACTTCCAGTTTAAAGAAAGCCACCATGTCTACCTTAACTGTGGACATAGCAAACAAGGAAA 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGACTCCAACTTCACTTCCAGTTTAAAGAAAGCCACCATGTCTACCTTAACTGTGGACATAGCAAACAAGGAAA 1480
Query 284 TTTCATGTGTGGATATCAAGCCACTGTCGACACTGATTTCAGTTGGCTGCGACCTGGATAAAAAGATCGTCATC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTTCATGTGTGGATATCAAGCCACTGTCGACACTGATTTCAGTTGGCTGCGACCTGGATAAAAAGATCGTCATC 1554
Query 358 CAGAACAAAGTTTCGGCCTGTTCCATGGGCATCCTGGACCCCTTGACCCTGCAAGACAATTACAGCTTCATCAT 431
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGAACAAAGTTTCCGCCTGTTCCATGGGCATCCTGGACCCCTTGACCCTGCAAGACAATTACAGCTTCATCAT 1628
Query 432 CGAGAAGGAATTCTACGACCCCGGCTTCCAGGGGCAGCAGTCCTCCGAGGACCTGCACGTGTTTTACTCCTACC 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CGAGAAGGAATTCTACGACCCCGGCTTCCAGGGGCAGCAGTCCTCCGAGGACCTGCACGTGTTTTACTCCTACC 1702
Query 506 AGCAGCTGGGCTGTCCTCTCCTCGTCTACTATGACACCCTATGGAAGCCCGTGGTGGAGCTGTGGCGAAAAGAC 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGCAGCTGGGCTGTCCTCTCCTCGTCTACTATGACACCCTATGGAAGCCCGTGGTGGAGCTGTGGCGAAAAGAC 1776
Query 580 AGTTTCCAGGAGGTCATCGACGCCGAGTATGTGTTACTGGAGGTGAACGGGCAGTTCTCATACTCCTATTCCCT 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGTTTCCAGGAGGTCATCGACGCCGAGTATGTGTTACTGGAGGTGAACGGGCAGTTCTCATACTCCTATTCCCT 1850
Query 654 GACGGCCCAGTCGGCCATGTGTACCTCCCAGCCGCAGAACTGGACCACCATGATAAAGGAATTCGGGGGGCCCT 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GACGGCCCAGTCGGCCATGTGTACCTCCCAGCCGCAGAACTGGACCACCATGATAAAGGAATTCGGGGGGCCCT 1924
Query 728 TCTTCTGGAACAGAG----------------------------------------------------------- 742
|||||||||||||||
Sbjct 1925 TCTTCTGGAACAGAGAGGCTTCAGATGTACCAAATCAGAAGAAACACTGTGCCTGGCTCGTGACCGCCCTCAGC 1998
Query 743 -------------------------------------------------------------------------- 742
Sbjct 1999 ATTCCTTCTGGGCGGCAGACGCAGTTTGTCAGTTTGCCAACATTCTGCTTTTATGAGAAAGTTTGCTGTTTACT 2072
Query 743 -----------------------------------------------------------------AGAACTATG 751
|||||||||
Sbjct 2073 CATATGGCCTCCAGTGGTATACGGAGTTGATCACCACCCTCAATCTTTCGGCCTCCAACAGAGGCAGAACTATG 2146
Query 752 TGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGG 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGAGCTGCCACGACCCCAACAACAATGCCCCTTTGAGGTGGCCAGACGTCCAGTATCAGATCTTGGGCGGCCGG 2220
Query 826 ACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTCTTCTACATTTCGATCGTGGATCCGTACTACAG 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ACAGCAAACCAGATCATTTTCGGCCACAATGGCTTTTATGTCTTCTACATTTCGATCGTGGATCCGTACTACAG 2294
Query 900 CTACTGTCAACTGGAGACCATCTTTAGCATCTACGTGTATGGAGCATTCCCCGTGCAGCTGGTCTCTGCTGGAG 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CTACTGTCAACTGGAGACCATCTTTAGCATCTACGTGTATGGAGCATTCCCCGTGCAGCTGGTCTCTGCTGGAG 2368
Query 974 TCGTCATCCTACTGATCATCTCCAGCATCCTGGGGTCCGTTTGGCTGGCCTACAAGACCCCCAAGCTGCTACGC 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCGTCATCCTACTGATCATCTCCAGCATCCTGGGGTCCGTTTGGCTGGCCTACAAGACCCCCAAGCTGCTACGC 2442
Query 1048 ACAGCACGCGGCCGCAGGATCAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCCAGTTCAG 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACAGCACGCGGCCGCAGGATCAAGAAGTGTGCGACACAGCTGTGTAGGAGATGCAAGACGGTCTGCCAGTTCAG 2516
Query 1122 GGCCTCAGCCACAGCCAGGGCAGGCACAGAGCCCCCGGGACGCCACGGCACTCCTCACGGAGGCAGGTCTGACC 1195
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 2517 GGCCTCAGCCACAGCCAGGGCAGGCACAGAGCCCCCGGGACGCCACCGCACTCCTCACGGAGGCAGGTCTGACC 2590
Query 1196 AC 1197
||
Sbjct 2591 AC 2592
