Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13497
- Subject:
- XM_006513933.3
- Aligned Length:
- 5100
- Identities:
- 580
- Gaps:
- 4428
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATCGAAGGAACCCCACAGCTCCACGCACATGCGTGGAGAGTCTCCTCCACGTGTTTCGCGCCTGTCCATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGATGGTGGATCCCTGCAATATTAACCAACAGAACATTGGGTATGCAGCACACTGTGATGTCATCCACCAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTCTTTGCTCCTTGCCATGTCTACGTCAGTCCCGGGCTGTACTACCAGTTGTGTCGCCACGATGCCTGCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTGGGAGCCCCTGCCTGTGTAACGCTCTCGCCCACTACGCCTACCTGTGTGGTCAGCGTGGTGTGCCCATTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCAGAGCTCACATCTCCTTCTGTGCTGTGGTGTGTCAGAAGGGCATGCTGTACCACCACTGCTCGTCACTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCTCCGCTCCTGCACCTCTCTCTCCTCCCCTGAGCAGTGCAAAGACGACTGTGCTGAAGGGTGCAACTGTCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGGCAAATTCTATGAAGAGACACTTAACTTTTGTGTGCCCATATATCACTGCCGGTGTCATTATAGGGGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATTTACCAGCCAGGGGAGCTCATTCCAACCCCCTCAGGCTTATGCCAGTGTTCAAATGGGACTGTGAAATGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAGCTAGCAACACCCTCTACTGTCCACGCCTGCCCAGAAGGGAAGGAATATTTTGACTGCAGGTTTCCTGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTGCGTTACCAGCTGGTGGTATAAACTGCGAGACGACGTGCGCAAACCTGGCCATGAACTTCACCTGTGCTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCCTCGCCTTGCATCAGTGGCTGCGTTTGTGCTGCAGGAATGGCAGAACACAAAGGAAAATGCTATGTTCCCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGCTGTCCCTGCATCTGGAAGGACTGGGAGTACAGCTCAGGGGAGGTCATCTCTACACCGTGTTACACCTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTTGTCGGCGGGGGATGTTCAATTGCACATATTATCCATGTCCTGCAGTATGCACAGTATATGGGGACCGGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTATCACTCCTTTGATGGATTGGAATATGACTATATCAGCGATTGCCAAGTGTTTTTGATAAAGAGTACAGACG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTCTGATATATCTGTGATTTCCCAAAACAAGAAATGCTTTGACAATGATATTGTTTGTTCTAAAAGTGTTTTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATCAATTGGAGACACTGAAATATACCTCAATGATGCTCCTTACAAACAGAAGCGATCAGGGTTTTTCCTGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCAGACCTGAGTACCAGCTCTGGAAGGCTGGGTTCTACATAGTAATATACTTCCCGGAGGAAGATATCACCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCTGTGGGATGAGAAGACAACCATCCACATCAAAGTCGGGCCACAGTGGAAGAACAAGCTGGCAGGATTGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGTAACTTTGACAAATGTACTTCCAATGACATGACAACATCTAATAACATTGAAGTGCGAAATGCTCAGGTGTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGAGACAGCTGGGCCTTAGGACAGTGTGAAGATCTTATGGAGGCCCTGAAGCCCTGCGAGGCACACCAAAACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATTTCCCTATGCCAAGAGAGAATGTTCCATTTTGTACAGTGATGTTTTTGCTCCTTGTCGCAATGTGATTGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCACCTCTTTTGCCAAGAACTGCCATGAAGACACGTGTAACTGTAACCTGGGTGGGGACTGTGAATGCCTATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TACCAGTGTGGCCGCATACGCTTACAAATGCTGCCAGGAAGGGGTGCCTGTTCACTGGAGGTCACCCACTGTCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGCCCTTGACTGTGAATATTATAATCAAGGGCTTGGGGAAGGACCTTATATGCTGGCAAGTTATGGGCAAAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGCCTTGTTCTTGGTGCCAATATGACCAGTAGAAGCGTTTTCTCTTTGCCCAGAAGCAACAATCGTGGTAATTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTTTTTATTTTTATGATCACTCCGGGCCTTTTCAAAGAGAAGACATCCTCATTGGCTCTTGTTTCCTTGGAAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGCTGAAAGGCCCAACTACTTTCTCTATGTCCACGACAATGACACTCTTAGCTTGAAGCTGTGGCGGGCAAAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCAGAATTTCATCAGAGAGCAACATTTTTCCACCACCAAGGCCTCTGGATTCCTGGCTACAGTGCATTCGAATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATACAGCAAGAAAGGCTACTTCATCGTTTTTATGGGTTCCAGTGTCAAAGCGTCAAAATACGATGACTCGGAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATTCAAGCAGTCAAGTAGCTTTAGCATAGAAGAAATCCAGGCAGTGGTCCCTTACAGGAGGATGTGCGAGTGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGATACGAACCTTGTGCTACTCCGTGTTTTAAAACATGCAGTGATCCAGAGGCCTTAGCCTGTACATTCCTTCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCGGTTGAAGGATGCTTGCCATATTGCCCCAAGAATATGATCCTGGATGAGACGACTCTTAAATGTGTTCACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGAAGACTGCATACCACTGTTTCCAACAGAACCAGCATTGCCACCAGACATTACCCCATCAGACATGACACCG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACCCCAGGTTTGGAATGCGAGCCTCAACAATTTGATCCTGTTTATAACTGTAGCCAATATATCTGCCTTAACAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGAGTGGACCTTCTACAACTGGTCTCTGAATTGCCCGAAGGACTTGGAAATGCCCGACTGTGGGTTCCGAGGCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGCCTGTTCAAGTGAATACTGATATATGCTGTCCGGAGTGGGAATGCCCCTGTCGGTGCTCCATGTTGTCAGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTGAGCATCATTACATTTGATGGGAACAGTGCAGCACTATCTAGTATGGCTTCTTACATCTTAGTAAGAGTCCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CGGGGAAATTGTAGTTGTTCACATTGACAAATGTTCCATGAATCAGAATGGACATGCCCTTAAAAAACCAGCTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTTTGGACGAATCTCAGGACTTTGTTTTAAGAAGCTAAATGTGACAACATCTATACATAAAATACTTATCAAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGAGTGGTAAGAAAGGTAGACGTGGATTCTATTGTTGTGCCTTTGCCCTTTTCAAGTCATGAGCTGTTCATAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGATTCTGGAACAATGTATGTGATTACTACTCCTGCTGGCTTAATCATAAAGTGGGCTCACCTTACAGGAATCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TAGACATTCACTTCGGCCCCCAGTTTAACTTGTCATCTTACACAGAAGGGCTTTGTGGGATTTGCAATGACAAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCAGATGATGACCTCAGGATGCAGAATGGCACCATCATTACCAACATGGAAGACATAGAGTTATTTATTGGCAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTGGGAAATTGAGAAATCATTTGAAGTGACAATGAGAAGACCTGTGAGGAACTGTACTGAATATGACTGCAGTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATTGCATCGAGTTATTGAACAGAGAAGGTTTCATTCCATGCCATGACAAAGTCTCACCAAGGGACTTTTGTGAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAATGTGGATCAACTACACCTACTTCTGGAGCTACGAATGTGATGCAATCTCTGCATATGTGGCTTTGTGCAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAAATTTGATATCTGCATTCAGTGGCGCACCCCTGACTATTGCCCTCTGAGTTGTCCAGAGGGAAAGGAATATC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGCCCTGTGTGAGACCATGTGAAGCAAGAACATGTCTCAACAAATGGTTCTATGGACACTCCTCATGTCTGAAT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTGAGAGAAGACTGTGTGTGCAAGAATGGAACCATTCTTCACCGGCCAGATAAAACACTATGCATCCCAGAGCA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGAATGTGTGTGCACTGACAGAGAGGAGCACCCCCGCAGTGCTGGGGAGATTTGGAATGGTGGCATAGATGAAT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GCACCCTCTACAAATGTCTGGAGGATGGAAACATTATTCCTATAGAGCCTGTCTGTGAAGAAGAGCCTTCCCCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATCTGTGAACGAACAGCTGAAGTGGTCATAGGCATTGTTGATAAGCTGACCTGCTGTTCTAAAAAAGTCTGTGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTGTGACATGAGTTTGTGTGACAGGACCATCCCACCATGCACAAATAGCCAGAAGTTGATCGTTGGCTATAGTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTCTTTCTTGTTGCCCACAGTATGAATGTGAATGTGATACGGTGAGATGTCCTGATATTTCAACGCCAGTTTGC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AGAGATGACCAGTTTGTGCTTCAAGTTCGACAGGGAGAGCCTTGCTGTTTCTACCCTTCCTGCGTTTGTAAGAC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATGCACTGAACCAACTCCACAATGTACCGATGGGGAATTCCTCACTGTTAATATCAATACTACACATTTATGCT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GTCCTCAGTACTACTGCGTTTGTGAGCCAGATCTTTGCCCTCCACCATCACTTGAGTGTGCAAAAGATATGAAC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CTGGTGAAAGAAAATGTATCTGGACAATGTTGCCCAAACTGGCGTTGCGAATGCAACTGTGAGACTCTTGTCAT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GCCAACCTGTGACGTGGGAGAATTTGCTGCAATAGATCAAAACTTTCAGACTGACTGTGGCTGTGTACAGTATC 4366
Query 1 --------------------------------------------------------------ATGATAAAGTAT 12
.|.|||||||||
Sbjct 4367 TCTGTGAAAAGGATGATGTGTGTGTGTTCCAAGAAGTATCAGTATTGAATCCTGGGCAATCTCTAATAAAGTAT 4440
Query 13 TTGGAAGAAGACTTTTGTTATGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACAGGCTTTCACACTCTGAA 86
||.|||||.||.|||||||||...||.||.||||||||.||||||||||||.||||.|.||||||.|||.||||
Sbjct 4441 TTAGAAGAGGAATTTTGTTATATAATCGAATGTCTGGATGAAAAAGATAACTATACCGACTTTCATACTTTGAA 4514
Query 87 TTTTACACTGGTGAATTGTTCAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTT 160
|.|||||.|||||||.|||||||||.|.|||||||.|||||||.||||.|.|||||||.|.||||||||||.||
Sbjct 4515 TGTTACAATGGTGAACTGTTCAAAAGACTGTGATGCTCACCAGATATACATTCCATCCTCCAGTGATTATGATT 4588
Query 161 GTTGTGGTACCTGCAAAAATGTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGG 234
|.|||||.||.||.||||||.||||||||||||||...|||||||||||||||||||||.||||.|.||..|||
Sbjct 4589 GCTGTGGAACATGTAAAAATATATCCTGCAAATTTATTATGGAAAATGGAACATCAGTTATATATGAGGAGGGG 4662
Query 235 AGTACCTGGCACTACAATTGCACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACAC 308
||.|||||||||||.||.||||.|||.||.|||||||||||.|||||.||.|||||||..|||||.|||||||.
Sbjct 4663 AGCACCTGGCACTATAACTGCAGCACGTACGAATGTGTTAACACTGAGGAGGGAGCAACGATTCTAAACTACAG 4736
Query 309 AATGGTCTGTCCCCCTTTTAATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCT 382
.|||||.||.||.|||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 4737 CATGGTTTGCCCTCCTTTTAATGAAACTGAATGCAAACTGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCT 4810
Query 383 GTTGCAAGATCTGCAAACGAGAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGAC 456
|||||||||||||||||||||||||..||||||||||||||||||||||||||||..||||||.||||||||||
Sbjct 4811 GTTGCAAGATCTGCAAACGAGAAGAGCGAATATGCCAGAAAGTGATCATTAAATCCATCATAAAGAAACAGGAC 4884
Query 457 TGTATGAGCCAAAGCCCTATAAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAA 530
|||.|.|||||||||.||||.|.|||.|||||||||||.||.||||||||.|||||||||||||||||||||||
Sbjct 4885 TGTGTAAGCCAAAGCTCTATTAGTGTGGCATCTTGTGATGGGAAATGCCCGTCAGCTACCATATATAACATCAA 4958
Query 531 TATTGAAAGTCACCTAAGATTCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATT 604
|.|||||||||||||.||.|||||||||||.|||||||||||||||||.||||||.||.|.|||||||||.|.|
Sbjct 4959 TGTTGAAAGTCACCTGAGGTTCTGCAAGTGCTGTCGTGAAAATGGAGTGCGAAACGTGACGGTGCCTCTGCACT 5032
Query 605 GCTCAGGAAATGGCACTGAAATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 672
||||||||||||||||||||.|.||||||||.||||||||.||.||||||||.||.|||||||||||.
Sbjct 5033 GCTCAGGAAATGGCACTGAAGTAATGTACACACTCCAGGAGCCGATAGACTGCACATGCCAGTGGAAC 5100
