Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13497
- Subject:
- XM_011538192.2
- Aligned Length:
- 6930
- Identities:
- 671
- Gaps:
- 6258
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGATGATAAGCCTCAATAACCCCAGAAAATATAAATTTGAAGCTACTTCTCCGAGATACTTTTTCCATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTATTAATTGGGGTGAGAGCAAAATAAAAGGTTCTTGTCCTTATGAATGCCTTAATGGAGCTTTCTGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACTGGAACATGTGACTGTCAAATATTTCAGGCTCTTGGGACAAGATGCCAGATCATCCCAAACATGGGCAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCAGAGATGGGATTTGTAAAACCTGGGGACAGTATCATTTTGAAACATTCGATGGCATCTACTATTACTTCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAAACTGTTCTTACATTTTTGCAAAGGACTGTGGTGATTTGGAGCCTCGGTACACTGTATGGGTTCATAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCCTAAATGCCTTGGTTCGGTGTATTCTTGTTATCGGTCAATCAGCTTGTTCTTTTCAAACCAAGAGGAAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGAATTTATGGTCATGAAATAAAAAAGAATGGAATCAGTTTAACATTGCCTCAGACAATTGGACAGATTTTCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGAAACTAGCTGACTACATTCTTGTGAAAACAACCTTTGGCTTTTCATTGGCTTGGGACGGGATATCTGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTACCTCAAGCTGTCTGAGGACCATAAGGGGAAATCATGTGGCCTATGTGGAAACTACAATGACATTCAATCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGATTTCATAATTCTGCAAGAGGACTATACAGAAGACATCGCTATGTTTGCAAATAGTTGGTCGGTGCAAAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCAGATGACACCAAATGTGTACTCACACCCTCAGATTTTCCAAATCCGTGCTCCAGTGGAATGCCAGCATTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAATCTTCTTCAAGTGTCAGATACTGTTGCAGTTTCCTTTTCTGAGCTGCCATGAGTATATCGATCCATAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATATATTGCCAGCTGTGTTAATGATCTTTGCAAAACTGATGATGATGAAACCTATTGCCGAGCAGCCACTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTATGCTAGAGCCTGCTCTCATGCTGGCTACCCTATTCAAGACTGGAGAGATGACTTTCCAGCATGCACTGATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATGTGATGATAGCTTTGTCCATCGGGACTGTATCAGTTGTTGTCCACCAACCTGCACATTTGAGAAGCAATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTGGGAGCAATCTCCATTGTCTTGATGGATGTTACTGCCCAGATGGCCTCGTAATGGACAATGGGACTTGCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCCTTGGAAAATTGCCCATGCGGTTTTCATGGATTAGCTTATTCAGTTGGTTCAAAAATTGAACAAGAATGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGAATGTGTGTGTGTTGGTGGAGTTTGGAACTGCACTGAGCAAGACTGTCCAGTTCAATGCTCAGTTGTAGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATACATCCTCGTGAAAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTGGAAAAGATAAATTCACGATTACTTTACAGAAAGCTCCCTGTGAGCAGAATCTTGGCTTGGTCTGCCTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTCTATAACTCTGATTCTGGAGGATGATTTTAACAAACAAGTGACCCTTGGTAGGGGAGGACAAATTCTCACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTCCTAACCAAGGCTTCAACCTGAATGGTATTGTTGAAATTCAAACTCTGTCATCCTTATTTATACTTCTAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AACCACATTTGGTTTAAAGATTCTGTTTGCTATAGATGGGGAAAGAATTTATATTCAGCTTACTAGCGCATGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAAGAAGAACATTAGGTCTGTGTGGCACTTTTAATGGCAACATAAGGGATGATTTTCTTTCTCCATCAGGCATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATAGAAGGTACACCACAACTTCACGCAAATGCGTGGAGAGTTTCTTCTACCTGTTTTGCACCTGTTCATGTCCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGGTGGACCCCTGTAACATCAATCAACAAAACATTGGGTATGCAGCACACTGTGATGTCATCCACCAGGAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCTTTGCTCCTTGCCACATCTATATTAGCCCTGGGCTGTACTATCAGCTATGCCGCCACGATGCATGCAAGTGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGAAGCTCCTGCCTGTGCAATGCTCTTGCCCACTATGCCTACCTCTGCGGCCAGCACGGTGTTCCCATTGATTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGAACTCAGATTTCTTTCTGTGCTGTGGTGTGCCAGAAGGGCATGCTGTACCATCACTGTTCCTCGTTCTGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCATTCCTGCATTTCTCTCTCTTCCCCGGAGCAGTGCAGTGATGACTGTGCTGAAGGCTGTAATTGTCCGGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGCAAATTCTATGAAGACACTCTTAACTTTTGTGTACCCATATTCCACTGCCGTTGTCATTATAGGGGCAGTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTATCAACCTGGAGAGCTCATCCCCACACCCTCGGGCTTATGCCAGTGTTCAAATGGGACTGTGAAATGTGATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATTAGCAACGCCCTCTGCTGTTCACATCTGCCCAGAGGGAAAAGAGTATTTCGACTGCAGGTTTCCTGACCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAATTACCAGCTGGTGGTGTTAATTGTGAGACTACATGTGCAAACCTAGCCATGAACTTCACCTGCACCCCATC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTCACCCTGTATAAGTGGCTGTGTTTGTGCTCCAGGAATGGCAGAGCACAGAGGAAAGTGTTATGTTCCTGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCTGCCCATGTATTTGGAAAGATTGGGAGTATCTCTCAGGAGAAGTGATTGCTACACCGTGTTACACCTGCGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGTCGACGAGGAATGTTCAATTGCACATATTATCCATGCCCAGCAGTGTGCACAATATACGGGGACCGACATTA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTATTCTTTTGATGGACTAGAATATGACTATATCAGTGATTGCCAGGTGTTTTTGATAAAGAGTGCAGATGATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGATATATCTGTCATTGCCCAGAACAAGAAATGCTTTGACAACGATATTGTTTGTTCTAAAAGTGTTTTGATT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCAGTTGGGGACACTGAAATTTACCTGAATGATACTCCTTACAAACAGAAACAATCAGGTTTTTTTCTGGAAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAAATCTACCTACCAGCTTTGGAAGGCTGGTTACTATATAGTAGTATACTTTCCAGAGAAAGATATCACTATTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTGGGATAGGAAGACAACTATTCATATCAAAGTTGGGCCACAGTGGAAGAACAAGCTATCAGGATTGTGTGGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AACTTTGACAAATGCACTTCAAATGATATGACCACATCTAATAACTTGGAAGTGAGAAATGCTCGGGTATTTGG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGATAGTTGGGCATTAGGACAGTGTGAAAGTCCAGATGAAACAATTAAACCCTGTGAGGCACATCAAAACAAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTCCTTATGCCAAGAAAGAATGCTCCATTTTGTACAGTGATATTTTTGCTTCTTGTCGCAATGTGATTGACGTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ACTTCTTTTGCCAAAAATTGTCATGAAGATACATGTAACTGCAATCTTGGTGGCGACTGTGAGTGTTTGTGCAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TAGTATAGCTGCATATGCATACAAGTGTTGTCAGGAAGGAATATCAATTCATTGGAGATCATCTACTGTTTGTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CACTTGATTGTGAATACTACAATGAAGGACTTGGAGAAGGACCATATATGCTGGCAAGCTATGGGCAGAGTGGC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTTGTTCTGGGGGCCAATATGACCAGCAGAAGCGTTTTCTGTTTGCCGAGAAGCAGTGTTCATACCAGTTTATT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TTTTTATTTTATGATCACTCCAGGCCTTTTCAAAGAGAAGGTATCATCATTAGCACTTGTTTCCTTGGAATCTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGAAAGGCCAAACTACTTTCTCTATGTCCATGACAATGATACTCTTAGCTTGGAGCTGTGGGAGGCGAATTCA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GCCTTTCATCGGAGAGCAACATTTTTCCACCATCAGGGCCTCTGGATTCCTGGTTACAGTGCATTTGAGTTATA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CAGCAAGAAAGGCTTTTTCATCATATTCACAGATTCTAGTGTCAAAGCATCAAAATATGATGATTCTGAAGAAT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTAAACATTCAAGTAGCTTCAGCATAGAAGAAATCCAGGCAGCAGTGCCTTACAGGAAGATGTGTGAATGGAGA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TATGAACCTTGTGCTACACCCTGTTTTAAAACATGTAGTGACCCTGAAGCACTAGCATGTAAATTTCTTCCACC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGTTGAAGGATGCTTGCCCTACTGCCCTAAAAATATGATCCTTGATGAGGTCACCCTCAAGTGTGTTTATCCAC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 GAGACTGTATACCTGTGATTCCCACAGAACCAACATTAATGCCACCAGCTAAGCCAACTGTGCCCATGTTTACA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GTTTGGGAAATGATTACTCCATCAGACATCACTGTGTTTGATATGCTAACACCAACTACAGGCTTGGAATGTGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GCCTCAGAAATTTGATCCTGTTTATGATTGTAGCCAATACATATGCCTTAATATGGAATGGCAGTTATACAACT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GGTCCCTTAATTGCCCAAAGGACGTGGAAATGCCTGACTGTGGTTTCCGAGGAAGGCCAGTTCAAGTGAACAGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GATATCTGCTGCCCTGAGTGGGAATGTCCTTGTCGGTGTTCCATGTTGTCAGAACTGAGCATTATTACATTTGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGGAAACAACGCAGCATTATATAGCATGGCTTCTTATATCTTAGTAAGAATTCCTGGTGAAATTATAGTTGCTC 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 ATATCGAAAAATGTTCCATGAATCAGAATGGAAACTCCTTAAAAAAGCTAGCTCCCTCTGGAAGAATCTCTGGA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CTTTGTTTTAAGAAGTTAAATGTGACAACACCCATACATAAAATAATTGTCAATCGGTTGGCAAGAAAGGTAGA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 AGTGGATTCCATTGTTGTGCCTTTGCCCTTTTCAAGTCAGGAACTGTCCATAGAGGATTCTGGTTCAATGTATG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TAATTACTACTCCAGCTGGACTAATCATAAAGTGGTCTCATCTTACAGGAATCATAGACATTCATTTTGGCTTC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 CGATTTAACTTGTCATCCTACACAGAAGGACTCTGTGGAATTTGCAATGAAGATCCGGATGATGATCTAAGGAT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GCAAAATGGCACAATTATTACAAATATGGAAGACATAGGATTATTTATTGAGAGCTGGGAAATTGAGAAATCAT 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TTGAAGTAACAATGAGAAGACCTGTTAGGAATTGTACTGAGCATGATTGCAGCCAGTGCATTGATTTATTAAAT 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 AGAAGAATTTTCATTCCATGTCATGATAAAGTTTCACCGGAAGACTTTTGTGAAAAGATGTGGATCAATTATAC 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 CTATTTTTGGAACTATGAATGTGATGCACTTTCTGCATATGTGGCTCTGTGCAACAAGTTTGATATCTGTATTC 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 AGTGGAGAACACCTGATTACTGCTCCCTGAGTTGCCCAGAGGGGAAGGAATATCAACCCTGTGTGCGACCTTGT 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 GAAGCAAGAACATGCCTGAACCAATGGTTCTATGGACACACTTCCTGTTTGAATCTAAGAGAAGACTGTGTGTG 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 CAAAGTTGGAACTATTCTTCACAGGCCACATTCAGCCCAGTGCATTCCAGAGAAAGAGTGTGCATGCACTGATA 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 GTGAAGACCAACCCCGCACTGCTGGGGAGATTTGGAATGGGGGCATTGATGAATGCACTCTATACAAATGTTTG 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 GAGAATGGAAGCATTATCCCTATAGAACCTGACTGTGATGAAGAGCCCACGCCAGTTTGTGAACGAGAAGCTGA 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 AGTTGTCATGGGCATCATTGATAAATGGACCTGCTGTTCAAAGGAAGTTTGTGGATGTGACACGACTTTGTGTG 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 AAACTAGCATTCCAACATGTACAAATAGTCAAAAATTGATTGTTGGCCACAGTCCTCTTTCTTGCTGTCCACAG 5772
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5773 TACAAATGTGAATGTGACCCATTGAAATGCCCCAGTATTTCAACACCAGAATGCAGAGAAGATCAATTCATGAT 5846
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5847 TCAAGTTCGACAGGAAGAACCTTGTTGTTTTTCCCCTTTTTGTGTTTGTGAATCTTGCACCAAACCTGTTCCAC 5920
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5921 TATGTCATGATGGGGAATTTCTCACAGTAGATCTTAATAGCACACACTTCTGTTGTCCTCAGTATTACTGTGTA 5994
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5995 TGTGAACCAAACCTTTGTCCTATGCCATTACTCAACTGTGCAGAAGATATGAATCTTGTGAAAGAAAATGTATC 6068
Query 1 -------------------------------------------------------------------------- 0
Sbjct 6069 TGGTCAATGTTGCCCAACATGGCACTGTGAATGTAACTGTGAAAACCTTATTATGCCAACTTGTGAAGTGGGAG 6142
Query 1 -------------------------------------------------------------------------- 0
Sbjct 6143 AATTTACTGCAATAGACCATAACTTCCAGAGTGATTGTGGATGCATACAGTATCTCTGTGAAAAGGATGATGTG 6216
Query 1 ------------------------------------------ATGATAAAGTATTTGGAAGAAGACTTTTGTTA 32
||||||||||||||||||||||||||||||||
Sbjct 6217 TGTGTATTTCAAGAAGTATCAGTATTGAATCCTGGACAATCCATGATAAAGTATTTGGAAGAAGACTTTTGTTA 6290
Query 33 TGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACAGGCTTTCACACTCTGAATTTTACACTGGTGAATTGTT 106
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 6291 TGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACGGGCTTTCACACTCTGAATTTTACACTGGTGAATTGTT 6364
Query 107 CAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTTGTTGTGGTACCTGCAAAAAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6365 CAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTTGTTGTGGTACCTGCAAAAAT 6438
Query 181 GTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGGAGTACCTGGCACTACAATTG 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6439 GTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGGAGTACCTGGCACTACAATTG 6512
Query 255 CACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACACAATGGTCTGTCCCCCTTTTA 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6513 CACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACACAATGGTCTGTCCCCCTTTTA 6586
Query 329 ATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGATCTGCAAACGA 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6587 ATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGATCTGCAAACGA 6660
Query 403 GAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGACTGTATGAGCCAAAGCCCTAT 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6661 GAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGACTGTATGAGCCAAAGCCCTAT 6734
Query 477 AAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAATATTGAAAGTCACCTAAGAT 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6735 AAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAATATTGAAAGTCACCTAAGAT 6808
Query 551 TCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATTGCTCAGGAAATGGCACTGAA 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6809 TCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATTGCTCAGGAAATGGCACTGAA 6882
Query 625 ATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 672
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6883 ATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 6930
