Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13497
- Subject:
- XM_011538193.1
- Aligned Length:
- 6717
- Identities:
- 671
- Gaps:
- 6045
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCAACGGCAGAGATGGGATTTGTAAAACCTGGGGACAGTATCATTTTGAAACATTCGATGGCATCTACTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTACTTCCCAGGAAACTGTTCTTACATTTTTGCAAAGGACTGTGGTGATTTGGAGCCTCGGTACACTGTATGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCATAACAGCCCTAAATGCCTTGGTTCGGTGTATTCTTGTTATCGGTCAATCAGCTTGTTCTTTTCAAACCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAATTCGAATTTATGGTCATGAAATAAAAAAGAATGGAATCAGTTTAACATTGCCTCAGACAATTGGACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATTTTCATTGAGAAACTAGCTGACTACATTCTTGTGAAAACAACCTTTGGCTTTTCATTGGCTTGGGACGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATCTGGGATCTACCTCAAGCTGTCTGAGGACCATAAGGGGAAATCATGTGGCCTATGTGGAAACTACAATGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTCAATCTGATGATTTCATAATTCTGCAAGAGGACTATACAGAAGACATCGCTATGTTTGCAAATAGTTGGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGCAAACTCCAGATGACACCAAATGTGTACTCACACCCTCAGATTTTCCAAATCCGTGCTCCAGTGGAATGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCATTTGAGGCAATCTTCTTCAAGTGTCAGATACTGTTGCAGTTTCCTTTTCTGAGCTGCCATGAGTATATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCCATACTTATATATTGCCAGCTGTGTTAATGATCTTTGCAAAACTGATGATGATGAAACCTATTGCCGAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCCACTGAGTATGCTAGAGCCTGCTCTCATGCTGGCTACCCTATTCAAGACTGGAGAGATGACTTTCCAGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCACTGATAAATGTGATGATAGCTTTGTCCATCGGGACTGTATCAGTTGTTGTCCACCAACCTGCACATTTGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGCAATGTCTTGGGAGCAATCTCCATTGTCTTGATGGATGTTACTGCCCAGATGGCCTCGTAATGGACAATGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACTTGCATCTCCTTGGAAAATTGCCCATGCGGTTTTCATGGATTAGCTTATTCAGTTGGTTCAAAAATTGAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGAATGTACTGAATGTGTGTGTGTTGGTGGAGTTTGGAACTGCACTGAGCAAGACTGTCCAGTTCAATGCTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTTGTAGGTGATTCTCACTTTACAACTTTTGATGGTCGACATTATTCTTTTATTGGCATGTGCCAATACATCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGTGAAAGGAACTGGAAAAGATAAATTCACGATTACTTTACAGAAAGCTCCCTGTGAGCAGAATCTTGGCTTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTGCCTTCAGTCTATAACTCTGATTCTGGAGGATGATTTTAACAAACAAGTGACCCTTGGTAGGGGAGGACAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTCTCACTAGTCCTAACCAAGGCTTCAACCTGAATGGTATTGTTGAAATTCAAACTCTGTCATCCTTATTTAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTTCTAAAAACCACATTTGGTTTAAAGATTCTGTTTGCTATAGATGGGGAAAGAATTTATATTCAGCTTACTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCGCATGGAAAAGAAGAACATTAGGTCTGTGTGGCACTTTTAATGGCAACATAAGGGATGATTTTCTTTCTCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCAGGCATGATAGAAGGTACACCACAACTTCACGCAAATGCGTGGAGAGTTTCTTCTACCTGTTTTGCACCTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCATGTCCCAGTGGTGGACCCCTGTAACATCAATCAACAAAACATTGGGTATGCAGCACACTGTGATGTCATCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACCAGGAGCTCTTTGCTCCTTGCCACATCTATATTAGCCCTGGGCTGTACTATCAGCTATGCCGCCACGATGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGCAAGTGTGGAAGCTCCTGCCTGTGCAATGCTCTTGCCCACTATGCCTACCTCTGCGGCCAGCACGGTGTTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATTGATTTCAGAACTCAGATTTCTTTCTGTGCTGTGGTGTGCCAGAAGGGCATGCTGTACCATCACTGTTCCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGTTCTGCCTCCATTCCTGCATTTCTCTCTCTTCCCCGGAGCAGTGCAGTGATGACTGTGCTGAAGGCTGTAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCCGGAAGGCAAATTCTATGAAGACACTCTTAACTTTTGTGTACCCATATTCCACTGCCGTTGTCATTATAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGGCAGTGTTTATCAACCTGGAGAGCTCATCCCCACACCCTCGGGCTTATGCCAGTGTTCAAATGGGACTGTGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATGTGATGAATTAGCAACGCCCTCTGCTGTTCACATCTGCCCAGAGGGAAAAGAGTATTTCGACTGCAGGTTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTGACCCTGAATTACCAGCTGGTGGTGTTAATTGTGAGACTACATGTGCAAACCTAGCCATGAACTTCACCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACCCCATCCTCACCCTGTATAAGTGGCTGTGTTTGTGCTCCAGGAATGGCAGAGCACAGAGGAAAGTGTTATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCCTGAAAGCTGCCCATGTATTTGGAAAGATTGGGAGTATCTCTCAGGAGAAGTGATTGCTACACCGTGTTAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACCTGCGTTTGTCGACGAGGAATGTTCAATTGCACATATTATCCATGCCCAGCAGTGTGCACAATATACGGGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCGACATTATTATTCTTTTGATGGACTAGAATATGACTATATCAGTGATTGCCAGGTGTTTTTGATAAAGAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGATGATTCAGATATATCTGTCATTGCCCAGAACAAGAAATGCTTTGACAACGATATTGTTTGTTCTAAAAGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GTTTTGATTTCAGTTGGGGACACTGAAATTTACCTGAATGATACTCCTTACAAACAGAAACAATCAGGTTTTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCTGGAAAACAAATCTACCTACCAGCTTTGGAAGGCTGGTTACTATATAGTAGTATACTTTCCAGAGAAAGATA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCACTATTCTTTGGGATAGGAAGACAACTATTCATATCAAAGTTGGGCCACAGTGGAAGAACAAGCTATCAGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTGTGTGGAAACTTTGACAAATGCACTTCAAATGATATGACCACATCTAATAACTTGGAAGTGAGAAATGCTCG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGTATTTGGAGATAGTTGGGCATTAGGACAGTGTGAAAGTCCAGATGAAACAATTAAACCCTGTGAGGCACATC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAACAAATTTCCTTATGCCAAGAAAGAATGCTCCATTTTGTACAGTGATATTTTTGCTTCTTGTCGCAATGTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATTGACGTTACTTCTTTTGCCAAAAATTGTCATGAAGATACATGTAACTGCAATCTTGGTGGCGACTGTGAGTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTGTGCACTAGTATAGCTGCATATGCATACAAGTGTTGTCAGGAAGGAATATCAATTCATTGGAGATCATCTA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGTTTGTTCACTTGATTGTGAATACTACAATGAAGGACTTGGAGAAGGACCATATATGCTGGCAAGCTATGGG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAGAGTGGCCTTGTTCTGGGGGCCAATATGACCAGCAGAAGCGTTTTCTGTTTGCCGAGAAGCAGTGTTCATAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAGTTTATTTTTTTATTTTATGATCACTCCAGGCCTTTTCAAAGAGAAGGTATCATCATTAGCACTTGTTTCCT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGGAATCTGCTGAAAGGCCAAACTACTTTCTCTATGTCCATGACAATGATACTCTTAGCTTGGAGCTGTGGGAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GCGAATTCAGCCTTTCATCGGAGAGCAACATTTTTCCACCATCAGGGCCTCTGGATTCCTGGTTACAGTGCATT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGAGTTATACAGCAAGAAAGGCTTTTTCATCATATTCACAGATTCTAGTGTCAAAGCATCAAAATATGATGATT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGAAGAATTTAAACATTCAAGTAGCTTCAGCATAGAAGAAATCCAGGCAGCAGTGCCTTACAGGAAGATGTGT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GAATGGAGATATGAACCTTGTGCTACACCCTGTTTTAAAACATGTAGTGACCCTGAAGCACTAGCATGTAAATT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCTTCCACCGGTTGAAGGATGCTTGCCCTACTGCCCTAAAAATATGATCCTTGATGAGGTCACCCTCAAGTGTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTTATCCACGAGACTGTATACCTGTGATTCCCACAGAACCAACATTAATGCCACCAGCTAAGCCAACTGTGCCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATGTTTACAGTTTGGGAAATGATTACTCCATCAGACATCACTGTGTTTGATATGCTAACACCAACTACAGGCTT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGAATGTGAGCCTCAGAAATTTGATCCTGTTTATGATTGTAGCCAATACATATGCCTTAATATGGAATGGCAGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TATACAACTGGTCCCTTAATTGCCCAAAGGACGTGGAAATGCCTGACTGTGGTTTCCGAGGAAGGCCAGTTCAA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GTGAACAGTGATATCTGCTGCCCTGAGTGGGAATGTCCTTGTCGGTGTTCCATGTTGTCAGAACTGAGCATTAT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TACATTTGATGGAAACAACGCAGCATTATATAGCATGGCTTCTTATATCTTAGTAAGAATTCCTGGTGAAATTA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TAGTTGCTCATATCGAAAAATGTTCCATGAATCAGAATGGAAACTCCTTAAAAAAGCTAGCTCCCTCTGGAAGA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 ATCTCTGGACTTTGTTTTAAGAAGTTAAATGTGACAACACCCATACATAAAATAATTGTCAATCGGTTGGCAAG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AAAGGTAGAAGTGGATTCCATTGTTGTGCCTTTGCCCTTTTCAAGTCAGGAACTGTCCATAGAGGATTCTGGTT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CAATGTATGTAATTACTACTCCAGCTGGACTAATCATAAAGTGGTCTCATCTTACAGGAATCATAGACATTCAT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TTTGGCTTCCGATTTAACTTGTCATCCTACACAGAAGGACTCTGTGGAATTTGCAATGAAGATCCGGATGATGA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TCTAAGGATGCAAAATGGCACAATTATTACAAATATGGAAGACATAGGATTATTTATTGAGAGCTGGGAAATTG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AGAAATCATTTGAAGTAACAATGAGAAGACCTGTTAGGAATTGTACTGAGCATGATTGCAGCCAGTGCATTGAT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TTATTAAATAGAAGAATTTTCATTCCATGTCATGATAAAGTTTCACCGGAAGACTTTTGTGAAAAGATGTGGAT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 CAATTATACCTATTTTTGGAACTATGAATGTGATGCACTTTCTGCATATGTGGCTCTGTGCAACAAGTTTGATA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TCTGTATTCAGTGGAGAACACCTGATTACTGCTCCCTGAGTTGCCCAGAGGGGAAGGAATATCAACCCTGTGTG 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 CGACCTTGTGAAGCAAGAACATGCCTGAACCAATGGTTCTATGGACACACTTCCTGTTTGAATCTAAGAGAAGA 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 CTGTGTGTGCAAAGTTGGAACTATTCTTCACAGGCCACATTCAGCCCAGTGCATTCCAGAGAAAGAGTGTGCAT 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 GCACTGATAGTGAAGACCAACCCCGCACTGCTGGGGAGATTTGGAATGGGGGCATTGATGAATGCACTCTATAC 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 AAATGTTTGGAGAATGGAAGCATTATCCCTATAGAACCTGACTGTGATGAAGAGCCCACGCCAGTTTGTGAACG 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 AGAAGCTGAAGTTGTCATGGGCATCATTGATAAATGGACCTGCTGTTCAAAGGAAGTTTGTGGATGTGACACGA 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 CTTTGTGTGAAACTAGCATTCCAACATGTACAAATAGTCAAAAATTGATTGTTGGCCACAGTCCTCTTTCTTGC 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 TGTCCACAGTACAAATGTGAATGTGACCCATTGAAATGCCCCAGTATTTCAACACCAGAATGCAGAGAAGATCA 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 ATTCATGATTCAAGTTCGACAGGAAGAACCTTGTTGTTTTTCCCCTTTTTGTGTTTGTGAATCTTGCACCAAAC 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 CTGTTCCACTATGTCATGATGGGGAATTTCTCACAGTAGATCTTAATAGCACACACTTCTGTTGTCCTCAGTAT 5772
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5773 TACTGTGTATGTGAACCAAACCTTTGTCCTATGCCATTACTCAACTGTGCAGAAGATATGAATCTTGTGAAAGA 5846
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5847 AAATGTATCTGGTCAATGTTGCCCAACATGGCACTGTGAATGTAACTGTGAAAACCTTATTATGCCAACTTGTG 5920
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5921 AAGTGGGAGAATTTACTGCAATAGACCATAACTTCCAGAGTGATTGTGGATGCATACAGTATCTCTGTGAAAAG 5994
Query 1 ---------------------------------------------------ATGATAAAGTATTTGGAAGAAGA 23
|||||||||||||||||||||||
Sbjct 5995 GATGATGTGTGTGTATTTCAAGAAGTATCAGTATTGAATCCTGGACAATCCATGATAAAGTATTTGGAAGAAGA 6068
Query 24 CTTTTGTTATGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACAGGCTTTCACACTCTGAATTTTACACTGG 97
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 6069 CTTTTGTTATGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACGGGCTTTCACACTCTGAATTTTACACTGG 6142
Query 98 TGAATTGTTCAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTTGTTGTGGTACC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6143 TGAATTGTTCAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTTGTTGTGGTACC 6216
Query 172 TGCAAAAATGTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGGAGTACCTGGCA 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6217 TGCAAAAATGTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGGAGTACCTGGCA 6290
Query 246 CTACAATTGCACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACACAATGGTCTGTC 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6291 CTACAATTGCACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACACAATGGTCTGTC 6364
Query 320 CCCCTTTTAATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGATC 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6365 CCCCTTTTAATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGATC 6438
Query 394 TGCAAACGAGAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGACTGTATGAGCCA 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6439 TGCAAACGAGAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGACTGTATGAGCCA 6512
Query 468 AAGCCCTATAAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAATATTGAAAGTC 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6513 AAGCCCTATAAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAATATTGAAAGTC 6586
Query 542 ACCTAAGATTCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATTGCTCAGGAAAT 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6587 ACCTAAGATTCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATTGCTCAGGAAAT 6660
Query 616 GGCACTGAAATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 672
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6661 GGCACTGAAATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 6717
