Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13497
- Subject:
- XM_017314041.1
- Aligned Length:
- 6792
- Identities:
- 580
- Gaps:
- 6120
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCATTGTGAAGAAACTCAGTTTGATGGTACCTTGGCGTGCTCTCTCCCTTCCTATACTGCTGGTTTCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGAGGATACGTTTGTGCGTCATCTGTCCTGTCAGAAACATCAGAAAGTGAGTTCTATGAAAATGAACAGAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCTCTGTTAGCAGTACAGTTTGAAGCAACCTCTCCGAGATATTTTTTCCACGAAGCTATTAATTGGGGTGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTAAAATAAAAGGTTCATGTCCTCATGAATGCCTTAACGGGGCTTTCTGTTCTAAGACGGGTACGTGTGACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAAATATTCCAGGCTCTCGGGACAAGGTGCCAGATTGTGCCAAACATGGGAAGTGGCAGAGATGGGATTTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACCTGGGGACAGTATCACTTTGAAACATTTGATGGAATCTACTATTATTTCCCAGGAAGTTGTTCTTATATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGCAAAGGACTGTGGTAATTTGGAGCCTCAGTACACAGTATGGGTCCATAATAGCCCAAAGTGCCTTGGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGTATTCTTGTTACCGCTCCATCAGCTTATTTTTTTCAAACCAAGAGGAAATTAGAATCTATGGACATGAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAGAAAAAATGGGATCAGTTTATCTCTGCCTCAGACACTTGGGCAGGTGCACTTAGAGAAGGTAGCTGACTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTCTGGTGAAGACGACCTTTGGATTTTCTTTGGCTTGGGATGGAATATCGGGAATTTACCTCAAACTCTCGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGCACAGAGGGAAATCATGTGGCTTGTGTGCAAATTATAATGGCATCCAGTCAGACGACTTTGTGATCCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAGGACTACACAGAAGACATTGCTATGTTTGCAAATAGCTGGCTGGTGCTAACTCCAGATGATACTAAATGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTACCTACGCCCTCAGACTTTCCAAATCCATGTTCCAGTGGAATGCCAGCATTTGAGGCAATCTTCTTCAAATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGATATTGTTACAGTTCCCCTTTCTGAGCTGCCACGAATACATTGATCCATACTTATACATTGCCAGCTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTAATGACCTGTGCAAAACTGATGACGATGAAACTTACTGTCGAGCAGCCACAGAGTACGCTAGAGCCTGTTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CACGCCGGCTTCCCCATTCAAGACTGGAGGGATGACTTTCCAGCATGCACTGATAAATGTGACGATAGCTTCGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACCGGGACTGTATCAGTTGTTGCCCTCCGAGCTGCACATTTGAGAAGCAGTGTCTTGGGAGCAATCTTCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCTTGATGGATGCTATTGTGCAGACGGCCTCATAATGGACAATGGAACTTGCATCTCTTTGGAGAGCTGCCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTAGTTTTCACGGATTAGCTTATTCAGTTGGTTCAAAAATCGAACAAGAGTGCACTGAATGTGTATGTGTTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGAGTTTGGAACTGCACCGAACATGACTGTCCAGTTCAGTGTTCTGTTGTGGGTGACTCTCATTTCACCACCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGATGGGCGTCATTACTCTTTTATTGGCTTGTGTCAGTACATCCTTGTGAAAGGAACTGGAAAAGATAGATTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACGATCACTTTGCAGAAGGCTCACTGTGAACAGAACCTGGGTTTGGTCTGCCTTCAGTCCATAACTCTAATACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGAGGATGACTTTAACAAACAAGTGACGCTCAGCAGAGGAGGCCAGATTGTCACCAGTCCCAACCAAGGCTTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCCTGAACGGCATTGTTGAAATTCAAACCCTGTCATCCTTATTCATTCTCCTAAGAACCACCTTTGGTTTAAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCTTGTTCGCTATTGATGGAGAAAGAATTTACATTCAGCTTTCCAGTGCCTGGAAAAGAAGGACATTAGGTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGCGGCACCTTTAATGGCAACATTAGGGATGATTTTCTTTCTCCATCAGGCATGATCGAAGGAACCCCACAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCACGCACATGCGTGGAGAGTCTCCTCCACGTGTTTCGCGCCTGTCCATGTCCCGATGGTGGATCCCTGCAAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTAACCAACAGAACACTGTGGTGTGTCAGAAGGGCATGCTGTACCACCACTGCTCGTCACTCTGCCTCCGCTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGCACCTCTCTCTCCTCCCCTGAGCAGTGCAAAGACGACTGTGCTGAAGGGTGCAACTGTCCTGAAGGCAAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTATGAAGAGACACTTAACTTTTGTGTGCCCATATATCACTGCCGGTGTCATTATAGGGGGAGCATTTACCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAGGGGAGCTCATTCCAACCCCCTCAGGCTTATGCCAGTGTTCAAATGGGACTGTGAAATGTGATGAGCTAGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACACCCTCTACTGTCCACGCCTGCCCAGAAGGGAAGGAATATTTTGACTGCAGGTTTCCTGACCCTGCGTTAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAGCTGGTGGTATAAACTGCGAGACGACGTGCGCAAACCTGGCCATGAACTTCACCTGTGCTCCATCCTCGCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCATCAGTGGCTGCGTTTGTGCTGCAGGAATGGCAGAACACAAAGGAAAATGCTATGTTCCCGAAAGCTGTCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTGCATCTGGAAGGACTGGGAGTACAGCTCAGGGGAGGTCATCTCTACACCGTGTTACACCTGTGTTTGTCGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGGGATGTTCAATTGCACATATTATCCATGTCCTGCAGTATGCACAGTATATGGGGACCGGCATTATCACTCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTGATGGATTGGAATATGACTATATCAGCGATTGCCAAGTGTTTTTGATAAAGAGTACAGACGATTCTGATAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATCTGTGATTTCCCAAAACAAGAAATGCTTTGACAATGATATTGTTTGTTCTAAAAGTGTTTTGATATCAATTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGACACTGAAATATACCTCAATGATGCTCCTTACAAACAGAAGCGATCAGGGTTTTTCCTGGAAAGCAGACCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGTACCAGCTCTGGAAGGCTGGGTTCTACATAGTAATATACTTCCCGGAGGAAGATATCACCATTCTGTGGGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAGAAGACAACCATCCACATCAAAGTCGGGCCACAGTGGAAGAACAAGCTGGCAGGATTGTGTGGTAACTTTG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACAAATGTACTTCCAATGACATGACAACATCTAATAACATTGAAGTGCGAAATGCTCAGGTGTTTGGAGACAGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TGGGCCTTAGGACAGTGTGAAGATCTTATGGAGGCCCTGAAGCCCTGCGAGGCACACCAAAACAAATTTCCCTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGCCAAGAGAGAATGTTCCATTTTGTACAGTGATGTTTTTGCTCCTTGTCGCAATGTGATTGACGTCACCTCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGCCAAGAACTGCCATGAAGACACGTGTAACTGTAACCTGGGTGGGGACTGTGAATGCCTATGTACCAGTGTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GCCGCATACGCTTACAAATGCTGCCAGGAAGGGGTGCCTGTTCACTGGAGGTCACCCACTGTCTGTGCCCTTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGTGAATATTATAATCAAGGGCTTGGGGAAGGACCTTATATGCTGGCAAGTTATGGGCAAAGTGGCCTTGTTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTGGTGCCAATATGACCAGTAGAAGCGTTTTCTCTTTGCCCAGAAGCAACAATCGTGGTAATTTATTTTTTATT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTTATGATCACTCCGGGCCTTTTCAAAGAGAAGACATCCTCATTGGCTCTTGTTTCCTTGGAATCTGCTGAAAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCCCAACTACTTTCTCTATGTCCACGACAATGACACTCTTAGCTTGAAGCTGTGGCGGGCAAACTCAGAATTTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATCAGAGAGCAACATTTTTCCACCACCAAGGCCTCTGGATTCCTGGCTACAGTGCATTCGAATTATACAGCAAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAAGGCTACTTCATCGTTTTTATGGGTTCCAGTGTCAAAGCGTCAAAATACGATGACTCGGAAGAATTCAAGCA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GTCAAGTAGCTTTAGCATAGAAGAAATCCAGGCAGTGGTCCCTTACAGGAGGATGTGCGAGTGGAGATACGAAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTTGTGCTACTCCGTGTTTTAAAACATGCAGTGATCCAGAGGCCTTAGCCTGTACATTCCTTCCACCGGTTGAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGATGCTTGCCATATTGCCCCAAGAATATGATCCTGGATGAGACGACTCTTAAATGTGTTCACCCAGAAGACTG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CATACCACTGTTTCCAACAGAACCAGCATTGCCACCAGACATTACCCCATCAGACATGACACCGACCCCAGGTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TGGAATGCGAGCCTCAACAATTTGATCCTGTTTATAACTGTAGCCAATATATCTGCCTTAACATGGAGTGGACC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TTCTACAACTGGTCTCTGAATTGCCCGAAGGACTTGGAAATGCCCGACTGTGGGTTCCGAGGCTGGCCTGTTCA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AGTGAATACTGATATATGCTGTCCGGAGTGGGAATGCCCCTGTCGGTGCTCCATGTTGTCAGAGTTGAGCATCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TTACATTTGATGGGAACAGTGCAGCACTATCTAGTATGGCTTCTTACATCTTAGTAAGAGTCCCCGGGGAAATT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GTAGTTGTTCACATTGACAAATGTTCCATGAATCAGAATGGACATGCCCTTAAAAAACCAGCTTCTTTTGGACG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 AATCTCAGGACTTTGTTTTAAGAAGCTAAATGTGACAACATCTATACATAAAATACTTATCAACAGAGTGGTAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GAAAGGTAGACGTGGATTCTATTGTTGTGCCTTTGCCCTTTTCAAGTCATGAGCTGTTCATAGAAGATTCTGGA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 ACAATGTATGTGATTACTACTCCTGCTGGCTTAATCATAAAGTGGGCTCACCTTACAGGAATCATAGACATTCA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTTCGGCCCCCAGTTTAACTTGTCATCTTACACAGAAGGGCTTTGTGGGATTTGCAATGACAATCCAGATGATG 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 ACCTCAGGATGCAGAATGGCACCATCATTACCAACATGGAAGACATAGAGTTATTTATTGGCAGCTGGGAAATT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 GAGAAATCATTTGAAGTGACAATGAGAAGACCTGTGAGGAACTGTACTGAATATGACTGCAGTCATTGCATCGA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GTTATTGAACAGAGAAGGTTTCATTCCATGCCATGACAAAGTCTCACCAAGGGACTTTTGTGAAAAAATGTGGA 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 TCAACTACACCTACTTCTGGAGCTACGAATGTGATGCAATCTCTGCATATGTGGCTTTGTGCAACAAATTTGAT 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 ATCTGCATTCAGTGGCGCACCCCTGACTATTGCCCTCTGAGTTGTCCAGAGGGAAAGGAATATCAGCCCTGTGT 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 GAGACCATGTGAAGCAAGAACATGTCTCAACAAATGGTTCTATGGACACTCCTCATGTCTGAATTTGAGAGAAG 5254
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5255 ACTGTGTGTGCAAGAATGGAACCATTCTTCACCGGCCAGATAAAACACTATGCATCCCAGAGCAAGAATGTGTG 5328
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5329 TGCACTGACAGAGAGGAGCACCCCCGCAGTGCTGGGGAGATTTGGAATGGTGGCATAGATGAATGCACCCTCTA 5402
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5403 CAAATGTCTGGAGGATGGAAACATTATTCCTATAGAGCCTGTCTGTGAAGAAGAGCCTTCCCCCATCTGTGAAC 5476
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5477 GAACAGCTGAAGTGGTCATAGGCATTGTTGATAAGCTGACCTGCTGTTCTAAAAAAGTCTGTGGCTGTGACATG 5550
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5551 AGTTTGTGTGACAGGACCATCCCACCATGCACAAATAGCCAGAAGTTGATCGTTGGCTATAGTGCTCTTTCTTG 5624
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5625 TTGCCCACAGTATGAATGTGAATGTGATACGGTGAGATGTCCTGATATTTCAACGCCAGTTTGCAGAGATGACC 5698
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5699 AGTTTGTGCTTCAAGTTCGACAGGGAGAGCCTTGCTGTTTCTACCCTTCCTGCGTTTGTAAGACATGCACTGAA 5772
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5773 CCAACTCCACAATGTACCGATGGGGAATTCCTCACTGTTAATATCAATACTACACATTTATGCTGTCCTCAGTA 5846
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5847 CTACTGCGTTTGTGAGCCAGATCTTTGCCCTCCACCATCACTTGAGTGTGCAAAAGATATGAACCTGGTGAAAG 5920
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5921 AAAATGTATCTGGACAATGTTGCCCAAACTGGCGTTGCGAATGCAACTGTGAGACTCTTGTCATGCCAACCTGT 5994
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5995 GACGTGGGAGAATTTGCTGCAATAGATCAAAACTTTCAGACTGACTGTGGCTGTGTACAGTATCTCTGTGAAAA 6068
Query 1 ----------------------------------------------------ATGATAAAGTATTTGGAAGAAG 22
.|.|||||||||||.|||||.|
Sbjct 6069 GGATGATGTGTGTGTGTTCCAAGAAGTATCAGTATTGAATCCTGGGCAATCTCTAATAAAGTATTTAGAAGAGG 6142
Query 23 ACTTTTGTTATGCTATAGAGTGTCTGGAAGAAAAAGATAACCATACAGGCTTTCACACTCTGAATTTTACACTG 96
|.|||||||||...||.||.||||||||.||||||||||||.||||.|.||||||.|||.|||||.|||||.||
Sbjct 6143 AATTTTGTTATATAATCGAATGTCTGGATGAAAAAGATAACTATACCGACTTTCATACTTTGAATGTTACAATG 6216
Query 97 GTGAATTGTTCAAAAAAATGTGATGTTCACCAGGTATATACTCCATCCCCAAGTGATTATGGTTGTTGTGGTAC 170
|||||.|||||||||.|.|||||||.|||||||.||||.|.|||||||.|.||||||||||.|||.|||||.||
Sbjct 6217 GTGAACTGTTCAAAAGACTGTGATGCTCACCAGATATACATTCCATCCTCCAGTGATTATGATTGCTGTGGAAC 6290
Query 171 CTGCAAAAATGTATCCTGCAAATTTCACATGGAAAATGGAACATCAGTTGTATACGCGGTAGGGAGTACCTGGC 244
.||.||||||.||||||||||||||...|||||||||||||||||||||.||||.|.||..|||||.|||||||
Sbjct 6291 ATGTAAAAATATATCCTGCAAATTTATTATGGAAAATGGAACATCAGTTATATATGAGGAGGGGAGCACCTGGC 6364
Query 245 ACTACAATTGCACCACATATGAATGTGTTAAAACTGATGAAGGAGCAATAATTCTGAACTACACAATGGTCTGT 318
||||.||.||||.|||.||.|||||||||||.|||||.||.|||||||..|||||.|||||||..|||||.||.
Sbjct 6365 ACTATAACTGCAGCACGTACGAATGTGTTAACACTGAGGAGGGAGCAACGATTCTAAACTACAGCATGGTTTGC 6438
Query 319 CCCCCTTTTAATGAGACTGAATGCAAAATGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGAT 392
||.|||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6439 CCTCCTTTTAATGAAACTGAATGCAAACTGAATGAAGGGATTGTGAAGCTTTATAATGAAGGCTGTTGCAAGAT 6512
Query 393 CTGCAAACGAGAAGAAAGAATATGCCAGAAAGTGATCATTAAATCGGTCATAAGGAAACAGGACTGTATGAGCC 466
|||||||||||||||..||||||||||||||||||||||||||||..||||||.|||||||||||||.|.||||
Sbjct 6513 CTGCAAACGAGAAGAGCGAATATGCCAGAAAGTGATCATTAAATCCATCATAAAGAAACAGGACTGTGTAAGCC 6586
Query 467 AAAGCCCTATAAATGTTGCATCTTGTGACGGCAAATGCCCATCAGCTACCATATATAACATCAATATTGAAAGT 540
|||||.||||.|.|||.|||||||||||.||.||||||||.||||||||||||||||||||||||.||||||||
Sbjct 6587 AAAGCTCTATTAGTGTGGCATCTTGTGATGGGAAATGCCCGTCAGCTACCATATATAACATCAATGTTGAAAGT 6660
Query 541 CACCTAAGATTCTGCAAGTGTTGTCGTGAAAATGGAGTACGAAACTTGTCTGTGCCTCTGTATTGCTCAGGAAA 614
|||||.||.|||||||||||.|||||||||||||||||.||||||.||.|.|||||||||.|.|||||||||||
Sbjct 6661 CACCTGAGGTTCTGCAAGTGCTGTCGTGAAAATGGAGTGCGAAACGTGACGGTGCCTCTGCACTGCTCAGGAAA 6734
Query 615 TGGCACTGAAATTATGTACACTCTCCAGGAACCCATAGACTGTACGTGCCAGTGGAAT 672
||||||||||.|.||||||||.||||||||.||.||||||||.||.|||||||||||.
Sbjct 6735 TGGCACTGAAGTAATGTACACACTCCAGGAGCCGATAGACTGCACATGCCAGTGGAAC 6792
