Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13507
- Subject:
- NR_027436.2
- Aligned Length:
- 3669
- Identities:
- 349
- Gaps:
- 3307
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCAGCGTTTGGGTGAAGACGGAGGCGGGTTCTGGACAGACGTACGCTGTCAGGGAGTGTTTACTTTGCCTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTTCTGTTCCTCCCCGCCCTGGTGCTGCTCCGGGTCACATACTCGTCCTGAGCCGGCTTCAGCCTCTCCGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTGTCCCGGAGCCATGGCCGAGTACTCTTATGCGAAGTCTACCAAGCTTGTGCTCAAGGGAACCAAGACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGAGGTGGGTCCTGCACCTCCGGCGGGAGCCTCCTCAGTTCTTTTCGGACGCACTCCACCCCCCTCGAATCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGGAAGCCGTGGCGCGGAGAGCCGGCTTTGTGGCCTCCCAGGCTTCGCCCTGGCCCCTGTCCGGGCTGGACGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGCCGGACCGCAGTTCCTGGCGCCTGTGCAGAGAGGGGCAGCCTCCCGCACTGACGACCCTGGAAACAGGATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACGGGCGGGTGACCCGTGGCCCCGTACCCACGAGTTTCAGTCCTCTGAGGCATCTCTGCAGGCCTCTGCCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGAAGAAAAAGAGCAAAGAGAAGAAGAGAAAAAGAGAAGAAGATGAAGAAACCCAGTTTGATATGTTGGAATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTGAACAGTAACAAACTTTGATGAAATTTCAGGAACCATAGCCATTGAAATGGATGAGGGAACCTATATACA 666
Query 1 -----------------------------------------------------ATGGCTTTGTTGGCCTCAAAT 21
|||||||||||||||||||||
Sbjct 667 TCCACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAGAAGGGGAAAATGGCTTTGTTGGCCTCAAAT 740
Query 22 GGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGAT 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCTGCTTTATTAGATGCAATGAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGAT 814
Query 96 CAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTCA 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 815 CAAGATTAGATCCTGTGCTGAAAGAGAAACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTAA 888
Query 170 AACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGTAAAGAAGAC 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACAATGTGAAATCAATTATGTAAAGAAATTTCAGAGCTTCCAAGAGCACAAACTTAAAATAAGTAAAGAAGAC 962
Query 244 AGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCATGAGACGCTTCTGGACAGTTTAG--GCTATGAG 315
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||| || || ||
Sbjct 963 AGTAAAATTCTTAAAAAGGCTCAGAAAGATGGATTTTTGCAAGAGACGCTTCTGGACAG---AGTCGC----AG 1029
Query 316 -CATAG-----------------ATGGAAGAGG-----------------TGGCTGC--TGT-ATTGGAT-CA- 349
||||| |.|||..||| ||||.|| .|| ||||.|| ||
Sbjct 1030 TCATAGCCTGCCTTCATCTCTGAAGGGACCAGGTAACACACGGAGTGCCTTGGCAGCCTCGTCATTGCATGCAA 1103
Query 350 ---------AGGATAT------------------------GAGCAGAGATG-GA-------------------- 369
|..|||| |||.|.||.|| ||
Sbjct 1104 TCTTCACAGACAATATCTCACTGCAGCCACCTTTCTACAGGAGTACAGGTGTGACATTATACTGATGACATCAT 1177
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1178 TCTCAGAGAAAATTCATTTTACACACTGAAGATACACAGACACAAAGAGCCTTATACAAAGGGAATGGACCTTT 1251
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1252 CCCCAACACAGTAGTGCAAGGCCCTGCCACTTTGCTTCAATTCCTGAAAATTCCTTGGTAAACTTGGGGCTGCT 1325
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1326 CTATTCCTGACAGTTTCAAGAAATAGTTATTCATCCTCTCAGCATCCACAACGTTAATACAAGCCCAACATTCT 1399
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1400 TTAATTTGTGTTTTGTTTTTTGGAGACATAGTCTTGCTCTGTCACACAGGCTGGTATGAAGTGGCATGATCTCA 1473
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1474 GCTCACTGCAGCCTTGACCTCCCAACCTCAAGCAATTCTCCCATTTCAGCTTTCCAAGTAGCTAGGACTACAGG 1547
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1548 TGTGTGCCATGACACTCAGCTAATTTTGTTTATTTTTTTGTAGAGAAAAGCTCTCGCTATGTTACCCGGGCTGG 1621
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1622 TCTCGAACTCCTGGGCTCAAGAGATCCTCTGGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGTGTGAGTCCAT 1695
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1696 GTGCCCAGCCCTTTAATTCTTTACTTGGGGTTCAGGTGACTACACATTTCTTACTTACAAATTTTACTTAATCT 1769
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1770 CGCTGATGCTGTCACTTGAAAGCTGACCCACCTTGAATGAAGCCTCCTCCAACAAGTCTGGAATCCATCCGAAT 1843
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1844 TTAAATTAACAGGCGCTCCTATGAATTCCATCAGAGAACACACTGTAGATGCTTTAGCAACCTCTTCCCATGCC 1917
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1918 TCCGAAGTATCTGGTTTGCATGTGGTGGCCATTAGTCATCCATGGGCTTCTGATGTAAAAAACAAACCTGCCTC 1991
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1992 TTTTGACCCTGTGCTGTACAGCATCAGGGCAGTGATTGCTGGCCACATACTGGACCCTTGAAACAGAGGGCTCT 2065
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2066 GCATCCATGTCCATGAGCCTTCATGCCCATCTGGCCATCAGGCCTTGGGAAGCAGCACCCCACAGCTTTGGCAC 2139
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2140 AGCTGCAGTGACCTCCTTGCCTCCGAATGGAGTCAAATCTTTACACGATGCAATTCTCATCTGCAGGAAGCACT 2213
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2214 GGCCTCCTTCATCCTTAGGCTACAGTGCTGACACTGGCCTCCTTCATCCTCAGACTGTGGTGCCAGATGTCACC 2287
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2288 CCTCTGCGAGGCCCTTGGGATCGACTGAGTGACCAGCAGTGAAGTTTGTCAGCCTTCTGAATGGATGCCATGAT 2361
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2362 CAGATGTGATGGAGCTCAGTGGGATTCTGCTGCTTTCCCTCCCTTAGCTAGGATGTCCCTGATAAAGGATGACA 2435
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2436 CACAAGCCTCAGCACAACTGGCCAAACTTGAGGTGGTCATCATAGCACTGATGCTGGGCCAACAATTAACCCCA 2509
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2510 CTTGTACCTTTTTACAAACTTTTTGACAATTGCCAAGAATTGTCCAGCTTCCCTCCCCATTGAATTAAATACAC 2583
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2584 TTCTTGTCTCATGGATACTCAGAATACCAATCAAGGTAACAGATGCCTTTATTTTAACTAAGGACACGGTACAG 2657
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2658 ATCTCACAGGGACACTCCTTATCCCTTGCAGAGTTCCAGACACTACTGATGGTCACCAAAGCAACATTTCATCA 2731
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2732 GAAAACACAGTGCTGGGCTTGTGAAGAAGGTGTCCAGCAGAGCTTCCACTGCTCCTGTAGGCTGCAGGAAGCTG 2805
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2806 CTTCAGTTGAGAGATACACTGAGCTCCTCAAAGAATTCCTATTTAAGGTACAAAGCAGCGAGTGGATGCCCTGC 2879
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2880 TGGATTCCACTATTGCCACAGGCTTTGATAACTCTAAGTTCATGCTCCTTAGGAAAGTGCACTTTTTACACCAA 2953
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2954 TGCTAGACAGTTCCCTCAGTTGCCTTTACTGGACATCAAGGAGTTCACATTTTTGACAATCTTTCAGTCCTGAA 3027
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3028 CTGTCCAAGGGGTGGAGGTAGCTCCATACAGGAAGCTGCCTGCTGCGTGTGGATCAGTAATATCAGACTTGCCC 3101
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3102 AACAGCTCACTGGAGACATGAAAACCCATGCATGGGGGATGCATGACGTCACCCAAATATTTACCACACGCTTG 3175
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3176 TGCTGCCAGAGACCCCAGATCACTTTTCCTGCCTCCTGCTAAACAAATGGGAGCAGTAGCTTCTCATCAGCCTC 3249
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3250 CACATTTCATTACTCATAATTGTGGCCTTCCTAATGTCTCATGCCCCTAAGCATTTATTACAATGTCTCAACAG 3323
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3324 CCTTCTCTCAGCCTCTCAAAATATTAGTCATCATTAAAATAAATGTCTGATGTTAAAGCATCAGGGTCAATTGT 3397
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3398 ACTGTGACACCTAAAATTTCATGCTGCATCCCACCAGGTCCTCAGCCTAATGGCTTTCATGCCCCCAACAGACT 3471
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3472 GCTAAACTCTTTGAATTAGTCAAGCACATCCCTCAAGGGACAAGGGGTTACCCCACCCTCTGATTTCTACCAAG 3545
Query 370 -------------------------------------------------------------------------- 369
Sbjct 3546 CCTGCCTCCCGCACCCTGTGCTCCAGAGTGAACCCCCGGGTAGACCTGCACAGATGCAGTGTCATCCCCTGTTG 3619
Query 370 ------------------------------------------- 369
Sbjct 3620 GGCTGAGTATGCGCGATGAATAAGTTACGGTGAATTTCGTCTA 3662
