Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13551
• Subject: XM_017008041.1
• Aligned Length: 867
• Identities: 426
• Gaps: 402

Alignment

Query   1  ATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTG  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTG  74

Query  75  CGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGAATGCTTGATTTGTAAAGCTCCTTGTC  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGAATGCTTGATTTGTAAAGCTCCTTGTC  148

Query 149  GTACAGTTTTGCTTTCAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAG  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  GTACAGTTTTGCTTTCAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAG  222

Query 223  AAGTACTCCAGGGAAACCTCCCAGTATCTCAGGCTTTCCCGAGGCTGTTGCCGTCTCAAGTTATGCCCAGCCAC  296
           ||||||||||||||||||||||||..|||.|.||       |||...|||.|.||      |.||||||.||.|
Sbjct 223  AAGTACTCCAGGGAAACCTCCCAGCTTCTGACGC-------AGGTCATTGTCCTC------TGTGCCCACCCCC  283

Query 297  ATCCTCCAAGGAGGTGCCCAGAGGCTCGAC------CCATGGAAGCCA------AGCAGCAGCCAGAGATCCCC  358
           |     ||      |||..||.|||.|..|      ||.||||.|.||      |||.||||       |||.|
Sbjct 284  A-----CA------TGCTGAGTGGCACTTCTGGCCTCCTTGGATGTCACCGGACAGCTGCAG-------TCCAC  339

Query 359  AAGAACACTGGGTCAGCACAACACGGGCACCCAGACCAGGA----TGCCGGCGGTCCCAGAGCCAGCCAGAGGC  428
           .||   .|||||                          |||    ||||.|        |||  ||..||.||.
Sbjct 340  CAG---TCTGGG--------------------------GGAAAGCTGCCAG--------GAG--AGGAAGGGGT  374

Query 429  CCATGGAAACACCATCCAGGACGCACCTCACCCCCTCACCCTGCTCCATCCCAGCAGGAC--CCTCATTCACAC  500
           ||.|                   |.|||..||||  |.||||||              ||  |||  |||    
Sbjct 375  CCTT-------------------CCCCTGGCCCC--CGCCCTGC--------------ACTTCCT--TTC----  407

Query 501  CAAGTCCCCTTGGGGCCGGAAGTTGCTTGAGTTCATAAAACATGTCTGTTATCACAGACATCAGAGCCACAGGC  574
                ||.|||                                                              |
Sbjct 408  -----CCTCTT--------------------------------------------------------------C  414

Query 575  CGTGCGCTCCAGGGTGGTTTTGCCAAGTGCTGCAGAGGCCAGGTGCTGTCTCAGGAGAGAAGACCCAGCAGACC  648
           ||||                    |||.| ||||          |||                ||||      |
Sbjct 415  CGTG--------------------AAGAG-TGCA----------GCT----------------CCCA------C  435

Query 649  C---GGCCAGACCCTCCAGCCACCTGTCTGCTCTGCCTCTCATGCCTCTCAGGCTTCCGGCATGGACCGTGG--  717
           |   ||||  |||      |||||||.||    ||                           |||     ||  
Sbjct 436  CGTTGGCC--ACC------CCACCTGCCT----TG---------------------------TGG-----GGAA  465

Query 718  AGATGGC----TGGCTCCAGCCTGGGCAGCACAGGCTCTGCCCAGTGACCTCGTGGCCCCACTGTTTGTCAGTT  787
           ||| |||    |||         ||||||| ||||.||                                    
Sbjct 466  AGA-GGCCTAGTGG---------GGGCAGC-CAGGATC------------------------------------  492

Query 788  ACACTGTGGAGGTGAGCGTCACAAACGCAGGGTGGAGTTTTCCCGCAGCTGTG  840
                                                                
Sbjct 493  -----------------------------------------------------  492