Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13615
- Subject:
- NR_134868.2
- Aligned Length:
- 4474
- Identities:
- 695
- Gaps:
- 3741
Alignment
Query 1 -------------------------ATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCAGACCCAGCGCCGAGCCCGAGCCATGGCGTCCGAGCGGCTCCCTAACAGGCCCGCCTGTCTGCTCGTGGCCA 74
Query 50 GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCGGCGCCGCCGAAGGTGTGTCGGCCCAGTCCTTCCTCCACTGTTTCACGATGGCCAGCACCGCCTTCAACCTG 148
Query 124 CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAGGTGGCCACCCCTGGGGGGAAAGCCATGGAATTTGTGGATGTGACTGAGAGCAATGCACGCTGGGTGCAAGA 222
Query 198 CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTCCGCCTCAAGGCTTACGCCAGCCCCGCCAAGCTCGAGTCCATCGATGGTGCCCGGTACCATGCCCTCCTGA 296
Query 272 TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCCCAGCTGTCCTGGGGCCCTGACCGACCTGGCCAGCAGTGGCTCCCTGGCCCGTATCCTGCAGCACTTCCAC 370
Query 346 TCTGAGAGCA---------------------------------------------------------------- 355
||||||||||
Sbjct 371 TCTGAGAGCAGTAGGTGACCCCTGGGACCCAGGGGAGGGGTTGGATGTGCAGTGTCACAAGAAATGGGTCTCCC 444
Query 356 ------------------------------AACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT 399
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCAGCAGAAGAGAGGTGGGAAGACTCCAGAACCCATCTGCGCCGTCGGCCACGGTGTCGCCGCCCTGTGCTGT 518
Query 400 GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCACCAACGAGGACAGATCCTGGGTGTTCGACAGCTACAGCCTGACAGGGCCCTCTGTGTGTGAGCTCGTCAG 592
Query 474 GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGGAG 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 593 GGCCCCCGGCTTCGCCCGCCTGCCGCTCGTGGTGGAGGACTTCGTGAAGGATTCGGGCGCCTGCTTCAGTGCA- 665
Query 548 CAGC-AGCCT---CCTGCCCCAAGGCC------GACCGGCAC-----------------TGGCAG---CACTTT 591
||| ||||| .|||.|| |.|.| |||||.||| ||.||| ||||.|
Sbjct 666 -AGCGAGCCTGACGCTGTCC--ACGTCGTGCTGGACCGCCACCTGGTCACAGGCCAGAATGCCAGCTCCACTGT 736
Query 592 CCTG---TTGAAGAA----ATCTTCCTGGCGTGTGGTTTCA-----AAGTG-----GCAGGG-----------C 637
||.| .||.|||| .||||||| .||||| || ||.|| ||.||| |
Sbjct 737 CCCGGCCGTGCAGAACCTGCTCTTCCT---CTGTGG---CAGCCGGAAATGAACCTGCTGGGTAGATGCACCCC 804
Query 638 TTGGGGCAGCACCAGG------CTGGGGCAG---------AGG----AGGAA-------------------AGC 673
.||.|.|||| ||||| |.|.||||| ||| |||.| | |
Sbjct 805 CTGAGACAGC-CCAGGTGTCTCCAGAGGCAGCCCCGTCTCAGGCTTCAGGGACCCCGCCTCTTCCCTCCTGA-C 876
Query 674 AAGAGGAC---------------------------------------AGACCTCCAGAAGAGCAG--CGGAGGG 706
||| ||.| ||.|||||.|.| |.||| |.|||||
Sbjct 877 AAG-GGCCCTGGATGGCAGCCTGGTCTGGCCCTGATGGGATTGTTGGAGGCCTCCTGGA-ATCAGCTCTGAGGG 948
Query 707 CGGGT-----------GAGG----ATTTCCCCATATACCAGTGTGTGTTCATCT-------------------A 746
.|.|| |||| |...||||||...|| ||..||||| ||| |
Sbjct 949 GGTGTCGGCTCTCCTGGAGGGTCCAAACCCCCATCCTCC--TGCATGTTC-TCTGGTAGGAGGCAGAGAAAAGA 1019
Query 747 CCCA---------------------------------------------------------------------- 750
|||.
Sbjct 1020 CCCCACGTGCCTGGAGAGCTGTGCTAGCTGCTAGGTGGTCCTCGGGAATTCCAGGCTGGGTTTTCTAGGGAGGA 1093
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1094 CTGGTTGTCACGTGTGGTCACTGTTGACTAGACAGAGTCGGCTCGGGGGTCCTCTGTGTGGGTTTGCCCTGCTG 1167
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1168 TGGCCTGTCTGCCACCCACCACCTCTTTCACTGTTGGTGGGGGCCTTGAGGGGAGGGCCCAGCCGGCGGGAGCT 1241
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1242 GGCTCAGAACTTTGGCCAAAGGTGAACGGAATTTTTTAGGAGCAGCAGCCTCCTGCCCCAAGGCCGACCGGCAC 1315
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1316 TGGCAGCACTTTCCTGTTGAAGAAATCTTCCTGGCGTGTGGTTTCAAAGTGTAAGCACCTCAGTGATGCACCCT 1389
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1390 GTCCTAAGCATTGAGAGGCACGTTTACTTGTGAATATGAGACCATGAGATTCTCAATGATAGGAAAGTGCTGTC 1463
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1464 CCCCACGGCCTTGCACAGTGGCCTCGGGTAGAGCGGCTATCAAGAGCAGACAGTGGTCCAGCCTGCTGGGCACC 1537
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1538 TGGCCTGGGCTGTGGCCCTCCAGCGGGCTGCCCCCTGGCCCCAGGTTAGGGCGTCCAGGAGAGGCTTAGGCCCT 1611
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1612 CTACTTCCTCACAGTTCCCCAGTTTGAGCCATCGAAGGCCTTCTTCCTGCCCACCTCCCCGTCTCAGCCACAGC 1685
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1686 CGTTCCCAAGCACCAGCGTGGCTCCTGGTGCCAGTGACCTGCCAGGAGGCCCCTTGTGATTATAAAACCGTTCA 1759
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1760 GTTGGGCCGGGCGCAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTC 1833
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1834 AGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAATACAAAAAGTTAGC 1907
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1908 CTGGCATGGTGGTGGGTGTGTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAG 1981
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1982 GCAGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAATAGAGTGAGACTCCATCTCAAAA 2055
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2056 AAAAAACGTTCAGTTGGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGG 2129
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2130 ATCATCTGAAGTCAGGAGTTTGGGAAAAGCCTGGCCAACATGGTGAAACTAAAATACAAAAATGAGCCGGGTGT 2203
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2204 GGTGTCAGGCGCCTGTATTCCCAGCTACTTGGGAGGCTGAGACGTGAGAATTGCTTGAACCTGGGAGGCGGAAG 2277
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2278 TTGCAGTGAGCCAAGATTGCGCCATTGCACTCCAACCTGGGCAATGAGTGAAACTCCGTCTCAAAAATAAAAAA 2351
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2352 TAATAAAATAAAGCCGTTCAATAAGGAGAATTTGGAAAAAAGTGGAAGAAGGAAGCGCTGCAGCCACATCCCCG 2425
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2426 CCCTGAAGGCTGCGTCCCTCCAGTGCCTCGCAGATTAGTCAGGATGCCCACTTAGCACTGGCCACGGGGCCTTG 2499
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2500 CTCTGTCCCGGGTCCACTCTCATCCCCGTGTGGTGATGGACCTCTGTGGACAAATGCTTTTTATTTTATTTATT 2573
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2574 TTTTGAGATGGAGTTTGTCTCTCGTCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGCTCACTGCAACCTCTG 2647
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2648 TCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGTGTGCGCCACCACGCCT 2721
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2722 GGCTAATTTTTGTATTTTTCGTAGAGACCGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA 2795
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2796 AGTGATCCTCCCGCCTCGGCCTCCCAAAGTGTTAGGATTACAGGCGTGAGCCACTGCGCCCGGCGTAATTTTTG 2869
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2870 TTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCATCTTC 2943
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2944 CTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCGCCACGTCCGGCTAACAAGTACTTTTTTATTTTTAT 3017
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3018 TTTATTTTTTGGATGGAGTCTCACTCTGTCGCCCAGGCTGGAACACAGTGGCACGATCTCGGCTCACTGCAGCC 3091
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3092 TCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTAGGACTACAGGTGCACACCACCAC 3165
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3166 ACCCAGCTAATTTTTGTATTTTTCCTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTTGGCAGGCTGGAGT 3239
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3240 GCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTCTGCCTCCCAGATTCAAGCAGTTCTCCTGCCTCAGCC 3313
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3314 TCCCGAGTAACTGGGACTACAGGTGCATGCCACTACGCCCAGCTAGTTTTTGTATTTTCAGTAGAGACGGGGTT 3387
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3388 TCACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCATGATCTGCCCGCCTCGGCTTCCCAAAGTGCTGGG 3461
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3462 ACTACAGGCAAGCTCATGTCTTAATGTCCTAGTCCATTTGGGCTCCTATAAGAAAATACTGTAAACTGGCCGGG 3535
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3536 CACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCG 3609
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3610 AGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAGAAATTAGCCGGGCGCGGTGGTGGGC 3683
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3684 GCCTGTAATCCCATTTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAG 3757
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3758 CTGACATCGTGCCACTGCACTCTAGTCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAAGAAAAT 3831
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3832 ATTGTAAACCTAGTGGCTTATAAACAACAGAAATCAGTTTCAGTTTTGGAGGCTGGAAGCCCAAGATGAAAGCA 3905
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3906 CCAGTAGATGCAACCTCTTTTGTGAGGGTGATGGTCCCATGATGAGGCTGTGCCCCTGCCCTGTGACCGGATGA 3979
Query 751 -------------------------------------------------------------------------- 750
Sbjct 3980 CCTCCCAAATGCCCCACCTAATACCATCCCCTTGCAGGTGAGGACTTAAGCAGGTGGGTTTTGGGGGGACGTGC 4053
Query 751 -------------------------------------------------------------------------- 750
Sbjct 4054 TCAGGCCACAGCAGGGTGCATGAAGAGCCAGTGAGCCTCATTGAGCCCCTCTGGTCAGCCAGATCTGACATTGA 4127
Query 751 -------------------------------------------------------------------------- 750
Sbjct 4128 GCCCAGCATTGAAGATCAAAGCAGGTGGGGCTTTGGGATGTGAAGTGGGTTCTGACGCGGGGCCCCACAGACCT 4201
Query 751 -------------------------------------------------------------------------- 750
Sbjct 4202 GTCTCCGCGTGAGCTGCCTGCAGGCCCCTGCGTCATTCCTCAGCTGCGTGCGAGGCCTCTGGCTTGGAGAGCCT 4275
Query 751 -------------------------------------------------------------------------- 750
Sbjct 4276 CCCCGCTGTGCACAGTTCTCTCTTTGCCAGGGCAGGGCTTGGGGCAGCACCAGGCTGGGGCAGAGGAGGAAAGC 4349
Query 751 -------------------------------------------------------------------------- 750
Sbjct 4350 AAGAGGACAGACCTCCAGAAGAGCAGCGGAGGGCGGGTGAGGATTTCCCCATATACCAGTGTGTGTTCATCTAC 4423
Query 751 ---------------------------------- 750
Sbjct 4424 CCATGAGGAATAAAACCATGCAGCAGCATGCAAA 4457
