Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13623
Subject:
NM_001145064.3
Aligned Length:
1020
Identities:
441
Gaps:
564

Alignment

Query    1  ATGAGCTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGC  74
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------ATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGC  42

Query   75  GTCGCCAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGT  148
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||.||||||||||||||
Sbjct   43  GTCGCCAAGGAGAGTATCCCGCTGTTCACCTAC-GGCCTGATCAAACTTGCCTTCCTGTCCTCCAAGACCAGGT  115

Query  149  GCAAGTTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTG  222
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  116  GCAAGTTCTTCAGTCTGACTGAGACGCCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTG  189

Query  223  CCCTCCTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTT  296
            ||||||||.|.|||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  190  CCCTCCTCGGAGCACCTGAGTGTGGCAGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTT  263

Query  297  CTCCAGCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATAT  370
            |||||||||||||||.||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  264  CTCCAGCTCCCAGCCCATCGGCGTGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATAT  337

Query  371  CCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCAC  444
            |||||||||||||||||||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||
Sbjct  338  CCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCGCGAGCGGGACCTGCCCTTTGTCACCCAC  411

Query  445  ACGTTGTCATCAGAGTTCACCATCCT----GTGGTCAGTGGCTAGACTG-------------------------  489
            ||.|||||||||||||||||||||||    ||.||||.||||.||||.|                         
Sbjct  412  ACATTGTCATCAGAGTTCACCATCCTGCGGGTCGTCAATGGCGAGACCGTGGCAGCCGAGAACCTCGGCATCAC  485

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  486  CAATGGCTTCGTGAAGCCCAAGCTGGTCCAGAGGCCAGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCT  559

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  560  GTGTCACCAGCCTGGACCCTGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTTCTACTCCAAT  633

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  634  GGAGTGAAGGACCCCATGGCCACTGGGGATGACTGCGGCCACATCCGCTTCTTCTCCTTCTCCCTCATCGAGGG  707

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  708  CTACATCTCCCTGGTGATGGACGTGCAGACGCAGCAGAGGTTTCCTAGTAACTTGCTGTTCACAAGCGCATCCG  781

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  782  GAGAGCTCTGGAAGATGGTCCGGATTGGAGGACAGCCCCTGGGGTTTGATGAGTGTGGCATCGTGGCCCAGATC  855

Query  490  --------------------------------------------------------------------------  489
                                                                                      
Sbjct  856  TCAGAGCCCTTGGCTGCTGCAGACATCCCAGCCTACTACATCAGTACTTTCAAGTTTGATCATGCACTTGTCCC  929

Query  490  ----------------------------------------------------------  489
                                                                      
Sbjct  930  CGAAGAGAACATCAATGGTGTCATCAGTGCCCTGAAGGTCAGCCAAGCAGAGAAGCAC  987