Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13623
- Subject:
- XR_001744712.1
- Aligned Length:
- 2988
- Identities:
- 487
- Gaps:
- 2499
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGGTGAGGA 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 TACAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCC 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 AGAACTGGCCTTGGTGTACCTTGTTGTAGTGTTTGAAAACATCTGAGGCTGCATCCATCTCCAGCACCCCATAA 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 AGCAACAGCTTGCAGAACCCGGCTAGGAGGCGGCGCCGCTGGTGTAGCCGCTCTATCTGTAAATGATCCTCCTG 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 GGAATCACCTGGCTCACATGGAAGGCAAAAGGGAATCACAGACTTAAGCTTCCTGCCCTATATTTCTGAGCTAC 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 ACCCAAGCCCCAGCCCTTACTGAGCCCCAGGTATAGAGTCACTGCACCACTGCCCAGGTCTCCCGGCTGGATGA 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 AGACGTGGTCCATGAGGAAGCTGGCTAGCTCAGACTGGAGAGTAGCTTCAGGAAAAAAGACAAGTGGCCTAAGG 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 AAATCACGGCCCCCAACAATCATCTGAGGGCTAAAGATGAGAAGTAGATCACTTAATAAGACAAAAGCCTGTAG 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 GGGGAAAAGAAAGGATGTTTAAAAGGACAGAATGTTTCCCAAGGTAGAAATGACACTGTCAATTTCTCCTTGGA 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 ATGGGGGCAGGGATACTCGCCTTGTTGCTCCCACTTGAGTCAGTACTCACCTGCTCCTGGATCTCAGTATCCAC 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 ATCTGAGAGGCAACTCTGGCAGAGTTCACAGAAGGCCACCATTCTGTCCCTCAAACTCGACAGCTGCTTCTGTG 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 GGCACAGTGGCTTGAAGGGGAAGAATGAAGACACAGACTCCTCTGTTCCCATTATCCCATCTAAGACCCACACT 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 CACCTGGGAAGCATCTGATTTAGAAATGTGGGTTAGTGTCCAGAGAATGGAAAAATAGACAAGAGTCAAGGCTG 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 GCAGGATAACCTGTAACAACAAAGGGTTTGAAAAATGAGGTTTGGGTTAGGAGAGGGAGAGACAGATAGCCAGA 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 AACACACCAGTGAAGAGGAGAGAAAATGAGTAAAGGGAGAGCTAATTCCTTTTCCAGTGGAAAATGAGTGATAT 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 TCTGGACATTCTTCAGAGGCATCTACACGAAGTAGAAATGTCACCGCTCCCTAATTTACTCTACGTCTTCTAGA 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 ATCCCTCAATATTATCCTTGGCTTCCAGGAAATCCAAGAAGACCCTGGAAGTAGAGTCCACCTTCTAAGAGAGG 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 AATGTAAGAGGTGACCCCCACCCACCTGATCTTCCTCGCTTTGTCCACTCCACGCACTGAGACTTGACACACCT 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 AGTGGCCACCTAGAACGTAGGTCCTTAAAATCTAGCCCCCCAGCCCCCAACCCATCTCTAGCCTGTCCACTCAC 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 CTGGTGAGGAACCTCTCCTGTGTCCACAGCCTTCTGCAGGAGTTGGCAACATGGCTCATAGAGCTCCCAGCGAG 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 TCAGGTCATGAGTGCTTTGGGGGAGAAAGGGGAATGTTATACTGGAAAAGAACAGAGGGAACCAACTCCACAGA 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 CACCAGTAAAAACGGGATGGGGAAGAGGAGGAAAGCCACTCACTTGTAGAAGGCAGAGAGGCGTTTCAGAGTGG 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 CTGCCAGATTATATACCTCATCCTCATCTAGGAAGGACGACTGAGAAGGAAAGAAGATCCACAATAGCATTTCC 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 CCCAGAACTCATCAGTCCACATCCCCCGTCTTGCAGCCCCTCCCACCCTTGTTTGGGGTGTCCCATTGTCCAGC 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 CCCAGCTCCTACCTGTAACAGCTCTTCAAGCTCCTGCTGGAAGCGGTCAGTCAGCAAATCTACTAGCTGGCTGC 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 GGGCAAAGTCCGCCCGGCTGAAGAAAGTGAATTCGGGATTACAGAGCAGGTAGAGGGCATGCGCCCCAGCCTCA 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 AGCACCGCTGGCTCTGCATGCTTCACCACCACCTCCTGGAGTTGCTGCAGGAACAGCTCCAGGTGCTGAGAAGA 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 AAAGGCAGAAGATGGTGTGCTGTGGGGATGGGAGGAGGACACTCTTCTGGCGGGAAGTGGAACGGGGTTAAAAG 2960
Query 490 ---------------------------- 489
Sbjct 2961 CATTAAACTTCAAGGATAAGATGCCTAA 2988
