Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13623
- Subject:
- XR_002956435.1
- Aligned Length:
- 4641
- Identities:
- 487
- Gaps:
- 4152
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCGGACCGCGCATGCGCAGTGGGGACCGGCGTTTGAGTGGCAAGTTGTTTGTTACAGCGAACACCAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCCCGCGCCGGCACCCGCGCGCCGCTGCTCCGCCGGCGCTGCCTCCCTCGACCCGTGGCTCCCCCTCGCAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCCCCCCGCGCCTGGCGCCGAGCTCCCGG 222
Query 1 ---------------------------------------------------------------------ATGAG 5
|||||
Sbjct 223 GTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGGCCGCGGCTCGTCCCCCAGCGGATGAG 296
Query 6 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAGCACCGGCTGCAAGTTGCCAGCGTCGC 370
Query 80 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCTTCCTGTTCTCCAAGACCAGGTGCAAG 444
Query 154 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGATGAGGAAGGATTCCTAGAGCTGCCCTC 518
Query 228 CTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 301
|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGTGGTGTCCGGCGGTGGCAGCTTCTCCA 592
Query 302 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCCGTG 666
Query 376 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGGGACCTGCCCTTTGTCACCCACACGTT 740
Query 450 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTG---------------------------------- 489
||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTCATCAGAGTTCACCATCCTGTGGTCAGTGGCTAGACTGTAGCAGCCGAGAACCTCGGCATCACCAGTGGCTT 814
Query 490 -------------------------------------------------------------------------- 489
Sbjct 815 CGTGAAGCCCAAGCTGGTCCAGATGCCGGTCATCCACCCACTGTCCAGCCCGAGCAACAGGTTCTGTGTCACCA 888
Query 490 -------------------------------------------------------------------------- 489
Sbjct 889 GCCTGGACCCCGACACGCTGCCTGCTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGGTGAGGA 962
Query 490 -------------------------------------------------------------------------- 489
Sbjct 963 TACAACTAGAAGCCAGCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCC 1036
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1037 AGAACTGTGAGAAATACATACCTGCTGTTTGTAAGACACCAGTCTATGGAATTCTGTTACAGTAGCCTGAACTC 1110
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1111 AGACATAGCCCTTTTCCATTTATAAGGTGGTTTTACCTTATATTTTATGTAAAAGGTCCATTTTATTTATTTTT 1184
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1185 GAATTGTTGATTTTTTTTTAAGAGACACGTGTTTACTATGTTACCCAGGCTGGACTCCAACTCCTGGACTATTG 1258
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1259 ATCCTCCTGTCTCCACCTCCCGAGTTGCTGGAACTACAGGCTAACAGCTCTGTTTTAAAGATGAGAAAATGGGC 1332
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1333 CCCACGCAGTGGCTCACACCTGTAATCCCAGCACTTAGGGAGGCTGAGCCAGGTGGAGCCACTTGAGGTCAGGT 1406
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1407 GTTCGAGATTAGCCTGGCCAACATGGCAAAACCCCGTCTCTACTAAAAATACAAAAAAAATTAGCCGGGCATGA 1480
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1481 TGGCGCGTGCCTGTAATCCCAGCTACTTGGGAGTCTGAGGCAGGAGAATTGCTTGAGCCCAGGAGGCAGAGGTT 1554
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1555 GCAGTGAGCCGAGACTATGCCACTGCACTCCAGCCTAGGTGACAAAGAGAGACTCTACCTCAAAAAATAAAAAT 1628
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1629 AATTAAAAAATAAAGATGAGAAAATGGAGGCTGAGGAGGGGTAAAAGCGCTAACTTGACATGGAGTTGAGGACT 1702
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1703 AGCACTCATGTCACCTCACTCCAAATGCCAGGCTTTTCCCACTACACCAGCAGCAGTTCCTCCTGGGGAAACAG 1776
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1777 GCTAGGTTAGAAAGGGAGTGAGGGAAGGGACAGGGAGGGGAAGCCCTCTAGTAGGGAGATGGAGGATAGGGGGT 1850
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1851 CATGTTTTGTGGGGAGAGACACTGAAGGGGCTGCCACTTGGACTGAATGACCTCCCACCTCCAGCATTAGGACT 1924
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1925 CCTTCCAATTCCTAGGGGGTTCGGAGGCAACAATATTTATTTAGGGATTGGGAGCGAGAGTGCTATTCCAACCT 1998
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1999 TCTTTGGTATTTGTAATTTCTTTTCCTTATTCTTTAATAAAAGTAGAGTCCAAGCAAAGTCCAAACCAACATAT 2072
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2073 AACCTGTCCTCCTTTACTCTAGATTCATTCAGCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAGGGGAAACA 2146
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2147 CCCTGGCTTCTCTTTGGCACATCAGCCCCTAGTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCACCATGTCTG 2220
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2221 TATCCTGCCGTTCTTCATTTGACTCATCCTGGATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAAGGCTGAGT 2294
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2295 CTGATGTAGGGGCAAAGAGACTGGCTTTTCAAACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGACACCCGGG 2368
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2369 GTGGGGGAAGTGGGGAGCAGTAAGTACAGCATAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTCTGTGGCTA 2442
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2443 AAACAAGTCCAAAAAGCACCCACAGAGAGGCAATGGGTGAGACAGGAATCCCCTCACAGTGGGCGACAGATCTG 2516
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2517 AAGTGAAGACAGGAGATGATGAGAAAAGCTCACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAAGGGTTGTG 2590
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2591 TGGAGTCTGGAAATATTGTGGACCCAAGAACCTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCTGGGAATGA 2664
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2665 AGCAGGATCAATGATGGGATAAAAATCAAGGGGCCTTGGTGTACCTTGTTGTAGTGTTTGAAAACATCTGAGGC 2738
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2739 TGCATCCATCTCCAGCACCCCATAAAGCAACAGCTTGCAGAACCCGGCTAGGAGGCGGCGCCGCTGGTGTAGCC 2812
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2813 GCTCTATCTGTAAATGATCCTCCTGGGAATCACCTGGCTCACATGGAAGGCAAAAGGGAATCACAGACTTAAGC 2886
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2887 TTCCTGCCCTATATTTCTGAGCTACACCCAAGCCCCAGCCCTTACTGAGCCCCAGGTATAGAGTCACTGCACCA 2960
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2961 CTGCCCAGGTCTCCCGGCTGGATGAAGACGTGGTCCATGAGGAAGCTGGCTAGCTCAGACTGGAGAGTAGCTTC 3034
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3035 AGGAAAAAAGACAAGTGGCCTAAGGAAATCACGGCCCCCAACAATCATCTGAGGGCTAAAGATGAGAAGTAGAT 3108
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3109 CACTTAATAAGACAAAAGCCTGTAGGGGGAAAAGAAAGGATGTTTAAAAGGACAGAATGTTTCCCAAGGTAGAA 3182
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3183 ATGACACTGTCAATTTCTCCTTGGAATGGGGGCAGGGATACTCGCCTTGTTGCTCCCACTTGAGTCAGTACTCA 3256
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3257 CCTGCTCCTGGATCTCAGTATCCACATCTGAGAGGCAACTCTGGCAGAGTTCACAGAAGGCCACCATTCTGTCC 3330
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3331 CTCAAACTCGACAGCTGCTTCTGTGGGCACAGTGGCTTGAAGGGGAAGAATGAAGACACAGACTCCTCTGTTCC 3404
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3405 CATTATCCCATCTAAGACCCACACTCACCTGGGAAGCATCTGATTTAGAAATGTGGGTTAGTGTCCAGAGAATG 3478
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3479 GAAAAATAGACAAGAGTCAAGGCTGGCAGGATAACCTGTAACAACAAAGGGTTTGAAAAATGAGGTTTGGGTTA 3552
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3553 GGAGAGGGAGAGACAGATAGCCAGAAACACACCAGTGAAGAGGAGAGAAAATGAGTAAAGGGAGAGCTAATTCC 3626
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3627 TTTTCCAGTGGAAAATGAGTGATATTCTGGACATTCTTCAGAGGCATCTACACGAAGTAGAAATGTCACCGCTC 3700
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3701 CCTAATTTACTCTACGTCTTCTAGAATCCCTCAATATTATCCTTGGCTTCCAGGAAATCCAAGAAGACCCTGGA 3774
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3775 AGTAGAGTCCACCTTCTAAGAGAGGAATGTAAGAGGTGACCCCCACCCACCTGATCTTCCTCGCTTTGTCCACT 3848
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3849 CCACGCACTGAGACTTGACACACCTAGTGGCCACCTAGAACGTAGGTCCTTAAAATCTAGCCCCCCAGCCCCCA 3922
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3923 ACCCATCTCTAGCCTGTCCACTCACCTGGTGAGGAACCTCTCCTGTGTCCACAGCCTTCTGCAGGAGTTGGCAA 3996
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3997 CATGGCTCATAGAGCTCCCAGCGAGTCAGGTCATGAGTGCTTTGGGGGAGAAAGGGGAATGTTATACTGGAAAA 4070
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4071 GAACAGAGGGAACCAACTCCACAGACACCAGTAAAAACGGGATGGGGAAGAGGAGGAAAGCCACTCACTTGTAG 4144
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4145 AAGGCAGAGAGGCGTTTCAGAGTGGCTGCCAGATTATATACCTCATCCTCATCTAGGAAGGACGACTGAGAAGG 4218
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4219 AAAGAAGATCCACAATAGCATTTCCCCCAGAACTCATCAGTCCACATCCCCCGTCTTGCAGCCCCTCCCACCCT 4292
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4293 TGTTTGGGGTGTCCCATTGTCCAGCCCCAGCTCCTACCTGTAACAGCTCTTCAAGCTCCTGCTGGAAGCGGTCA 4366
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4367 GTCAGCAAATCTACTAGCTGGCTGCGGGCAAAGTCCGCCCGGCTGAAGAAAGTGAATTCGGGATTACAGAGCAG 4440
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4441 GTAGAGGGCATGCGCCCCAGCCTCAAGCACCGCTGGCTCTGCATGCTTCACCACCACCTCCTGGAGTTGCTGCA 4514
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4515 GGAACAGCTCCAGGTGCTGAGAAGAAAAGGCAGAAGATGGTGTGCTGTGGGGATGGGAGGAGGACACTCTTCTG 4588
Query 490 ----------------------------------------------------- 489
Sbjct 4589 GCGGGAAGTGGAACGGGGTTAAAAGCATTAAACTTCAAGGATAAGATGCCTAA 4641
